Detailed information
Bioinformatically predicted
Overview
| Name | abrB | Type | Regulator |
| Locus tag | EXW29_RS09890 | Genome accession | NZ_CP036090 |
| Coordinates | 1953988..1954275 (+) | Length | 95 a.a. |
| NCBI ID | WP_000648323.1 | Uniprot ID | A0A1V6LCK0 |
| Organism | Bacillus toyonensis strain JAS13/1 | ||
| Function | repression of comK; repression of rok (predicted from homology) Competence regulation |
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Genomic Context
Location: 1948988..1959275
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EXW29_RS09870 (EXW29_10050) | - | 1950070..1950267 (+) | 198 | WP_097953349.1 | DUF4083 domain-containing protein | - |
| EXW29_RS09875 (EXW29_10060) | - | 1950397..1950858 (+) | 462 | WP_000796418.1 | NUDIX hydrolase | - |
| EXW29_RS09880 (EXW29_10065) | nadE | 1950901..1951719 (-) | 819 | WP_000174898.1 | ammonia-dependent NAD(+) synthetase | - |
| EXW29_RS09885 (EXW29_10070) | - | 1951993..1953873 (+) | 1881 | WP_097953350.1 | ABC transporter permease | - |
| EXW29_RS09890 (EXW29_10075) | abrB | 1953988..1954275 (+) | 288 | WP_000648323.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Regulator |
| EXW29_RS09895 (EXW29_10080) | - | 1954536..1955486 (+) | 951 | WP_001089053.1 | serine protease | - |
| EXW29_RS09900 (EXW29_10085) | - | 1955527..1955835 (-) | 309 | WP_001259900.1 | helix-turn-helix transcriptional regulator | - |
| EXW29_RS09905 (EXW29_10090) | - | 1955944..1956879 (+) | 936 | WP_215595950.1 | aldo/keto reductase | - |
| EXW29_RS09910 (EXW29_10095) | - | 1957121..1957345 (-) | 225 | WP_000162608.1 | hypothetical protein | - |
| EXW29_RS09915 (EXW29_10100) | - | 1957430..1957777 (-) | 348 | WP_000426317.1 | DUF4257 domain-containing protein | - |
| EXW29_RS09920 (EXW29_10105) | - | 1957972..1958499 (+) | 528 | WP_097953352.1 | DinB family protein | - |
Sequence
Protein
Download Length: 95 a.a. Molecular weight: 10635.40 Da Isoelectric Point: 5.8675
>NTDB_id=346630 EXW29_RS09890 WP_000648323.1 1953988..1954275(+) (abrB) [Bacillus toyonensis strain JAS13/1]
MKATGVIRKVDELGRIVIPKELRDVLGIQIKSPLEIFVDEDKVILQKYEPYNACQITGDVSDQNISLANGNITVSIDGAK
HLIKEIEKFLKKSEI
MKATGVIRKVDELGRIVIPKELRDVLGIQIKSPLEIFVDEDKVILQKYEPYNACQITGDVSDQNISLANGNITVSIDGAK
HLIKEIEKFLKKSEI
Nucleotide
Download Length: 288 bp
>NTDB_id=346630 EXW29_RS09890 WP_000648323.1 1953988..1954275(+) (abrB) [Bacillus toyonensis strain JAS13/1]
ATGAAAGCAACAGGAGTTATTCGAAAAGTAGACGAATTAGGACGAATTGTTATTCCTAAAGAATTAAGAGATGTATTAGG
TATACAAATTAAATCACCACTTGAAATTTTCGTAGATGAAGATAAAGTCATTTTACAAAAATATGAACCTTACAATGCTT
GTCAAATAACAGGTGATGTTTCAGATCAGAACATATCATTAGCAAATGGAAACATTACTGTTAGTATAGATGGAGCGAAA
CATTTAATAAAAGAAATAGAGAAGTTTTTAAAAAAAAGTGAGATTTAG
ATGAAAGCAACAGGAGTTATTCGAAAAGTAGACGAATTAGGACGAATTGTTATTCCTAAAGAATTAAGAGATGTATTAGG
TATACAAATTAAATCACCACTTGAAATTTTCGTAGATGAAGATAAAGTCATTTTACAAAAATATGAACCTTACAATGCTT
GTCAAATAACAGGTGATGTTTCAGATCAGAACATATCATTAGCAAATGGAAACATTACTGTTAGTATAGATGGAGCGAAA
CATTTAATAAAAGAAATAGAGAAGTTTTTAAAAAAAAGTGAGATTTAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| abrB | Bacillus subtilis subsp. subtilis str. 168 |
56.044 |
95.789 |
0.537 |