Detailed information
Bioinformatically predicted
Overview
| Name | sinR | Type | Regulator |
| Locus tag | EXW29_RS06410 | Genome accession | NZ_CP036090 |
| Coordinates | 1248358..1248681 (-) | Length | 107 a.a. |
| NCBI ID | WP_000578873.1 | Uniprot ID | A0A2B5EZM0 |
| Organism | Bacillus toyonensis strain JAS13/1 | ||
| Function | repression of rok; repression of degU; repression of spo0A (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1243358..1253681
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EXW29_RS06385 (EXW29_06505) | - | 1243633..1244919 (+) | 1287 | WP_097954229.1 | D-alanyl-D-alanine carboxypeptidase family protein | - |
| EXW29_RS06390 (EXW29_06510) | sipW | 1245115..1245684 (+) | 570 | WP_000767788.1 | signal peptidase I SipW | - |
| EXW29_RS06395 (EXW29_06515) | - | 1245747..1246334 (+) | 588 | WP_000172853.1 | CalY family protein | - |
| EXW29_RS06400 (EXW29_06520) | - | 1246456..1247271 (+) | 816 | WP_215595891.1 | DUF4047 domain-containing protein | - |
| EXW29_RS06405 (EXW29_06525) | calY | 1247682..1248275 (+) | 594 | WP_000053723.1 | biofilm matrix protein CalY | - |
| EXW29_RS06410 (EXW29_06530) | sinR | 1248358..1248681 (-) | 324 | WP_000578873.1 | helix-turn-helix domain-containing protein | Regulator |
| EXW29_RS06415 (EXW29_06535) | - | 1248761..1248895 (-) | 135 | WP_000276222.1 | anti-repressor SinI family protein | - |
| EXW29_RS06420 (EXW29_06540) | inhA1 | 1249241..1251628 (+) | 2388 | WP_097954228.1 | M6 family metalloprotease immune inhibitor InhA1 | - |
| EXW29_RS06425 (EXW29_06545) | - | 1251786..1253153 (+) | 1368 | WP_097954227.1 | aldehyde dehydrogenase | - |
Sequence
Protein
Download Length: 107 a.a. Molecular weight: 12389.26 Da Isoelectric Point: 9.6238
>NTDB_id=346627 EXW29_RS06410 WP_000578873.1 1248358..1248681(-) (sinR) [Bacillus toyonensis strain JAS13/1]
MIGERIKRLRLQKGISLTELAEKAGVAKSYISSIERNLQKNPSIQFLEKIAAVLQIPVDTLLHDETEKEARLDSEWTQLV
KDAMNSGVSKEQFREFLEFTQWKKNQK
MIGERIKRLRLQKGISLTELAEKAGVAKSYISSIERNLQKNPSIQFLEKIAAVLQIPVDTLLHDETEKEARLDSEWTQLV
KDAMNSGVSKEQFREFLEFTQWKKNQK
Nucleotide
Download Length: 324 bp
>NTDB_id=346627 EXW29_RS06410 WP_000578873.1 1248358..1248681(-) (sinR) [Bacillus toyonensis strain JAS13/1]
ATGATTGGAGAACGTATAAAACGCCTTCGTTTACAAAAAGGTATTTCATTAACTGAACTTGCCGAAAAAGCTGGTGTTGC
TAAATCTTACATTAGTTCTATAGAACGAAATTTACAAAAAAACCCTTCCATTCAGTTTCTTGAAAAAATCGCAGCAGTTC
TACAAATTCCAGTTGATACTTTACTTCATGACGAAACAGAAAAGGAAGCTCGCCTAGACTCCGAATGGACACAGCTCGTT
AAAGACGCAATGAACTCTGGTGTCTCTAAAGAACAGTTTCGTGAATTTCTTGAATTTACACAGTGGAAGAAAAATCAAAA
ATAA
ATGATTGGAGAACGTATAAAACGCCTTCGTTTACAAAAAGGTATTTCATTAACTGAACTTGCCGAAAAAGCTGGTGTTGC
TAAATCTTACATTAGTTCTATAGAACGAAATTTACAAAAAAACCCTTCCATTCAGTTTCTTGAAAAAATCGCAGCAGTTC
TACAAATTCCAGTTGATACTTTACTTCATGACGAAACAGAAAAGGAAGCTCGCCTAGACTCCGAATGGACACAGCTCGTT
AAAGACGCAATGAACTCTGGTGTCTCTAAAGAACAGTTTCGTGAATTTCTTGAATTTACACAGTGGAAGAAAAATCAAAA
ATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| sinR | Bacillus subtilis subsp. subtilis str. 168 |
68.807 |
100 |
0.701 |