Detailed information
Bioinformatically predicted
Overview
| Name | abrB | Type | Regulator |
| Locus tag | EXW29_RS00220 | Genome accession | NZ_CP036090 |
| Coordinates | 40448..40732 (-) | Length | 94 a.a. |
| NCBI ID | WP_000843036.1 | Uniprot ID | A0A9W5VII1 |
| Organism | Bacillus toyonensis strain JAS13/1 | ||
| Function | repression of comK; repression of rok (predicted from homology) Competence regulation |
||
Genomic Context
Location: 35448..45732
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EXW29_RS00185 (EXW29_00190) | tmk | 35601..36227 (+) | 627 | WP_000677211.1 | dTMP kinase | - |
| EXW29_RS00190 (EXW29_00195) | holB | 36263..37246 (+) | 984 | WP_000169567.1 | DNA polymerase III subunit delta' | - |
| EXW29_RS00195 (EXW29_00200) | - | 37252..38079 (+) | 828 | WP_000272428.1 | stage 0 sporulation family protein | - |
| EXW29_RS00200 (EXW29_00205) | yabA | 38094..38444 (+) | 351 | WP_000412058.1 | DNA replication initiation control protein YabA | - |
| EXW29_RS00205 (EXW29_00210) | - | 38566..39306 (+) | 741 | WP_215595860.1 | tRNA1(Val) (adenine(37)-N6)-methyltransferase | - |
| EXW29_RS00210 (EXW29_00215) | - | 39293..39583 (+) | 291 | WP_000414346.1 | GIY-YIG nuclease family protein | - |
| EXW29_RS00215 (EXW29_00220) | rsmI | 39552..40427 (+) | 876 | WP_097954959.1 | 16S rRNA (cytidine(1402)-2'-O)-methyltransferase | - |
| EXW29_RS00220 (EXW29_00225) | abrB | 40448..40732 (-) | 285 | WP_000843036.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Regulator |
| EXW29_RS00225 (EXW29_00230) | metG | 41213..43222 (+) | 2010 | WP_097954958.1 | methionine--tRNA ligase | - |
| EXW29_RS00230 (EXW29_00235) | - | 43391..44158 (+) | 768 | WP_000895828.1 | TatD family hydrolase | - |
| EXW29_RS00235 (EXW29_00240) | rnmV | 44378..44935 (+) | 558 | WP_000692838.1 | ribonuclease M5 | - |
Sequence
Protein
Download Length: 94 a.a. Molecular weight: 10490.17 Da Isoelectric Point: 4.7174
>NTDB_id=346611 EXW29_RS00220 WP_000843036.1 40448..40732(-) (abrB) [Bacillus toyonensis strain JAS13/1]
MKSTGIVRKVDELGRVVIPIELRRTLGIAEKDALEIYVDDEKIILKKYKPNMTCQVTGEVSDGNLSLAEGKIILSKEGAE
QILNELQDYIETAK
MKSTGIVRKVDELGRVVIPIELRRTLGIAEKDALEIYVDDEKIILKKYKPNMTCQVTGEVSDGNLSLAEGKIILSKEGAE
QILNELQDYIETAK
Nucleotide
Download Length: 285 bp
>NTDB_id=346611 EXW29_RS00220 WP_000843036.1 40448..40732(-) (abrB) [Bacillus toyonensis strain JAS13/1]
ATGAAATCTACTGGTATTGTTCGTAAAGTTGATGAATTAGGTCGTGTTGTAATTCCAATCGAATTACGCCGTACTTTAGG
TATTGCAGAAAAGGATGCACTTGAAATTTATGTTGATGACGAAAAAATCATCTTAAAAAAATATAAACCAAACATGACTT
GCCAAGTAACTGGTGAAGTATCTGATGGTAACCTATCTTTAGCTGAAGGTAAAATTATCTTAAGCAAAGAAGGCGCTGAG
CAAATCTTAAACGAACTTCAAGATTATATCGAAACAGCAAAATAA
ATGAAATCTACTGGTATTGTTCGTAAAGTTGATGAATTAGGTCGTGTTGTAATTCCAATCGAATTACGCCGTACTTTAGG
TATTGCAGAAAAGGATGCACTTGAAATTTATGTTGATGACGAAAAAATCATCTTAAAAAAATATAAACCAAACATGACTT
GCCAAGTAACTGGTGAAGTATCTGATGGTAACCTATCTTTAGCTGAAGGTAAAATTATCTTAAGCAAAGAAGGCGCTGAG
CAAATCTTAAACGAACTTCAAGATTATATCGAAACAGCAAAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| abrB | Bacillus subtilis subsp. subtilis str. 168 |
85.106 |
100 |
0.851 |