Detailed information NTG0346576

Bioinformatically predicted

Overview

• Name: recF
• Type: Machinery gene
• Locus tag: EXW46_RS07155
• Genome accession: NZ_CP036085
• Coordinates: 1395924..1397051 (-)
• Length: 375 a.a.
• NCBI ID: WP_002034987.1
• Uniprot ID: -
• Organism: Bacillus mycoides strain JAS12/5
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1390924..1402051

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EXW46_RS07145 (EXW46_07230)	gyrA	1391403..1393874 (-)	2472	WP_131247014.1	DNA gyrase subunit A	-
EXW46_RS07150 (EXW46_07235)	gyrB	1393963..1395885 (-)	1923	WP_033708486.1	DNA topoisomerase (ATP-hydrolyzing) subunit B	-
EXW46_RS07155 (EXW46_07240)	recF	1395924..1397051 (-)	1128	WP_002034987.1	DNA replication/repair protein RecF	Machinery gene
EXW46_RS07160 (EXW46_07245)	yaaA	1397064..1397276 (-)	213	WP_002016484.1	S4 domain-containing protein YaaA	-
EXW46_RS07165 (EXW46_07250)	dnaN	1397405..1398550 (-)	1146	WP_107888244.1	DNA polymerase III subunit beta	-
EXW46_RS07170 (EXW46_07255)	dnaA	1398733..1400073 (-)	1341	WP_002016481.1	chromosomal replication initiator protein DnaA	-
EXW46_RS07175 (EXW46_07260)	rpmH	1400637..1400771 (+)	135	WP_000831901.1	50S ribosomal protein L34	-
EXW46_RS07180 (EXW46_07265)	rnpA	1400848..1401195 (+)	348	WP_002089963.1	ribonuclease P protein component	-
EXW46_RS07185 (EXW46_07270)	spoIIIJ	1401248..1402015 (+)	768	WP_002089960.1	YidC family membrane integrase SpoIIIJ	-

Sequence

Protein

• Length: 375 a.a.
• Molecular weight: 43514.79 Da
• Isoelectric Point: 6.8418

>NTDB_id=346576 EXW46_RS07155 WP_002034987.1 1395924..1397051(-) (recF) [Bacillus mycoides strain JAS12/5]
MFITEIQLKNYRNYEHLELSFEDKVNVIIGENAQGKTNLMEAIYVLAMAKSHRTSNDRELIRWDEDYGNIKGRLQRRNSS
ISLELNISKKGKKAKLNQLEQQKLSQYIGEMNVVMFAPEDLNLVKGSPQVRRRFLDMELGQIAPVYLYELSQYQKVLTQR
NHLLKKMQGNSKNEETMLDVFTLQLIEHGAKILRKRFEFLHLLQEWAAPIHRGISRGLEELEIVYKPSVDVSESMDLSKI
KEVYYESFQSVKQREIFRGTTLLGPHRDDLQFFVNSKNVQVFGSQGQQRTTALSLKLAEIELIYSEVKEYPILLLDDVLS
ELDDYRQSHLLNTIQGKVQTFVTTTSVEGIEHETLKEAKTIHVTNGTVDCEIDRK

Nucleotide

• Length: 1128 bp

>NTDB_id=346576 EXW46_RS07155 WP_002034987.1 1395924..1397051(-) (recF) [Bacillus mycoides strain JAS12/5]
TTGTTTATTACAGAAATACAATTAAAAAACTATCGCAATTATGAGCATTTAGAGCTTTCCTTTGAGGATAAAGTCAATGT
AATTATTGGTGAAAATGCGCAAGGGAAAACGAATCTGATGGAAGCTATTTATGTATTGGCGATGGCGAAATCTCATAGAA
CTTCGAACGATCGTGAACTCATTCGTTGGGATGAGGATTATGGTAATATAAAAGGTAGATTACAAAGGCGAAATAGTTCA
ATATCCTTAGAATTAAATATTTCAAAAAAAGGTAAAAAGGCAAAGTTAAATCAGTTAGAACAACAAAAATTGAGCCAGTA
TATTGGTGAAATGAATGTTGTTATGTTTGCCCCAGAAGATTTAAATCTTGTAAAAGGAAGCCCTCAAGTACGAAGACGCT
TTTTGGATATGGAACTTGGACAAATAGCTCCGGTCTATTTGTATGAATTAAGTCAATATCAAAAGGTACTCACGCAACGA
AATCATTTACTTAAGAAGATGCAAGGGAATAGTAAAAATGAGGAAACTATGTTGGATGTATTTACACTTCAACTTATTGA
GCATGGTGCAAAAATTTTGCGAAAACGTTTTGAGTTTTTGCATTTACTACAAGAATGGGCTGCTCCAATTCATCGCGGAA
TTAGCAGGGGATTAGAGGAGTTAGAAATCGTTTATAAACCAAGTGTAGATGTATCAGAATCAATGGATTTGTCGAAAATA
AAAGAAGTATACTATGAAAGTTTTCAATCTGTGAAACAACGTGAAATTTTTCGGGGTACAACTTTACTTGGTCCTCATCG
TGATGATTTACAATTCTTCGTTAATAGTAAAAATGTTCAAGTCTTTGGTTCACAAGGACAACAACGAACAACCGCACTAT
CCCTAAAATTGGCTGAAATTGAATTGATATACTCAGAGGTTAAGGAATATCCAATTCTTTTACTAGATGATGTGTTATCA
GAATTAGATGATTATCGTCAATCGCATCTGCTAAATACAATTCAAGGAAAAGTACAAACCTTTGTGACAACGACGAGTGT
CGAGGGAATTGAACATGAAACATTGAAAGAAGCGAAAACAATTCATGTAACGAACGGCACGGTAGATTGTGAAATAGACA
GAAAATAA

Domains

Predicted by InterproScan.

• RecF/RecN/SMC N terminal domain (SMC_N) (2-351)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recF	Bacillus subtilis subsp. subtilis str. 168	67.12	98.133	0.659