Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   GII88_RS22040 Genome accession   NZ_CP045814
Coordinates   4250802..4251509 (-) Length   235 a.a.
NCBI ID   WP_003177869.1    Uniprot ID   A0AA90EY57
Organism   Bacillus licheniformis strain P8_B2     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 4245802..4256509
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GII88_RS22020 (GII88_22020) - 4245845..4246933 (-) 1089 WP_003177863.1 acyltransferase family protein -
  GII88_RS22025 (GII88_22025) - 4247081..4248967 (-) 1887 WP_017474424.1 ABC transporter permease -
  GII88_RS22030 (GII88_22030) - 4248942..4249706 (-) 765 WP_003177865.1 ABC transporter ATP-binding protein -
  GII88_RS22035 (GII88_22035) - 4249798..4250805 (-) 1008 WP_003177867.1 sensor histidine kinase -
  GII88_RS22040 (GII88_22040) braR 4250802..4251509 (-) 708 WP_003177869.1 response regulator transcription factor Regulator
  GII88_RS22045 (GII88_22045) - 4251692..4252063 (+) 372 WP_003177872.1 YxeA family protein -
  GII88_RS22050 (GII88_22050) - 4252092..4253777 (-) 1686 WP_003177874.1 methyl-accepting chemotaxis protein -
  GII88_RS22055 (GII88_22055) - 4253932..4255356 (-) 1425 WP_003177876.1 sodium:alanine symporter family protein -

Sequence

Protein


Download         Length: 235 a.a.        Molecular weight: 27044.93 Da        Isoelectric Point: 4.9777

>NTDB_id=346575 GII88_RS22040 WP_003177869.1 4250802..4251509(-) (braR) [Bacillus licheniformis strain P8_B2]
MQKVMIVEDDPKIADLLKSHIVKYGYNVHVVKDFDRVMDEFRSTAPDLVLLDINLPSFDGYYWCRQIRQESICPVLFISA
RTGEMDQVMALENGGDDFITKPFHAEIVMAKIRSQLRRAYGEYAAKAEERLLEKEGLRLYPERLELTFAGQTAALTKKEA
DIIESLMERHPRISGREDLLAKLWDDQAYVDENTLNVNITRVRKKFQELGIEDAVETVRGAGYRLNVSWVKAGEE

Nucleotide


Download         Length: 708 bp        

>NTDB_id=346575 GII88_RS22040 WP_003177869.1 4250802..4251509(-) (braR) [Bacillus licheniformis strain P8_B2]
ATGCAAAAAGTGATGATTGTAGAAGACGACCCGAAAATTGCAGATTTGTTAAAATCGCATATTGTCAAATACGGATACAA
CGTTCATGTAGTGAAAGACTTTGACCGTGTCATGGATGAGTTCAGAAGCACGGCGCCTGATCTTGTTCTGCTTGATATTA
ACCTGCCGAGCTTTGACGGCTACTACTGGTGCCGGCAAATCCGCCAGGAATCGATTTGCCCCGTCTTGTTTATTTCTGCG
CGGACAGGTGAAATGGATCAGGTGATGGCATTGGAAAACGGCGGAGATGACTTTATCACCAAGCCGTTTCACGCCGAGAT
CGTCATGGCAAAAATACGCAGCCAGCTTCGCAGGGCTTACGGCGAATACGCGGCGAAGGCGGAGGAACGGCTGCTGGAAA
AAGAAGGGCTGCGGCTGTATCCGGAAAGACTTGAACTGACATTTGCCGGTCAAACGGCTGCTTTGACGAAAAAAGAAGCG
GATATTATTGAAAGCTTAATGGAACGCCATCCGAGAATTTCAGGCCGCGAAGATTTGCTGGCCAAGCTGTGGGATGATCA
GGCATATGTGGATGAAAACACGCTTAATGTCAACATTACGCGCGTCAGAAAAAAGTTTCAGGAGCTCGGTATTGAAGATG
CAGTGGAAACAGTGCGGGGCGCGGGCTATCGCTTGAATGTATCCTGGGTGAAGGCGGGAGAGGAATGA

Domains

Predicted by InterProScan.

Response regulator receiver domain (Response_reg)

(4-112)

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(150-225)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0AA90EY57

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

39.91

94.894

0.379