Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0A   Type   Regulator
Locus tag   EXW59_RS25900 Genome accession   NZ_CP036084
Coordinates   4165017..4165811 (-) Length   264 a.a.
NCBI ID   WP_002015081.1    Uniprot ID   R8I3Q7
Organism   Bacillus mycoides strain JAS1004     
Function   activation and repression of comK; repression of rok; repression of abrB (predicted from homology)   
Competence regulation

Genomic Context

Location: 4160017..4170811
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EXW59_RS32805 - 4160566..4160664 (-) 99 Protein_4190 sporulation initiation factor Spo0A C-terminal domain-containing protein -
  EXW59_RS25880 (EXW59_26450) - 4160903..4161178 (-) 276 WP_098635955.1 hypothetical protein -
  EXW59_RS25885 (EXW59_26455) - 4161215..4161787 (-) 573 WP_098635954.1 DUF1629 domain-containing protein -
  EXW59_RS25890 (EXW59_26460) - 4162006..4162575 (-) 570 WP_098635953.1 DUF1629 domain-containing protein -
  EXW59_RS25895 (EXW59_26465) - 4162611..4164269 (-) 1659 Protein_4194 AHH domain-containing protein -
  EXW59_RS25900 (EXW59_26475) spo0A 4165017..4165811 (-) 795 WP_002015081.1 sporulation transcription factor Spo0A Regulator
  EXW59_RS25905 (EXW59_26485) spoIVB 4166098..4167390 (-) 1293 WP_002015079.1 SpoIVB peptidase -
  EXW59_RS25910 (EXW59_26490) recN 4167510..4169249 (-) 1740 WP_002088564.1 DNA repair protein RecN Machinery gene
  EXW59_RS25915 (EXW59_26495) argR 4169520..4169969 (-) 450 WP_002015076.1 arginine repressor ArgR -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 29525.32 Da        Isoelectric Point: 7.1180

>NTDB_id=346539 EXW59_RS25900 WP_002015081.1 4165017..4165811(-) (spo0A) [Bacillus mycoides strain JAS1004]
MEKIKVCLVDDNKELVSMLESYVAAQDDMEVIGIAYNGQECLNLLKEKQPDILVLDIIMPHLDGLAVLEKMRHIERLRQP
SVIMLTAFGQEDVTKKAVDLGASYFILKPFDMENLTSHIRQVSGKESATIKRPLPSFRSATTIDGKPKNLDASITSIIHE
IGVPAHIKGYMYLREAISMVYNDIELLGSITKVLYPDIAKKYNTTASRVERAIRHAIEVAWSRGNIDSISSLFGYTVSMS
KAKPTNSEFIAMVADKLRLEHKAS

Nucleotide


Download         Length: 795 bp        

>NTDB_id=346539 EXW59_RS25900 WP_002015081.1 4165017..4165811(-) (spo0A) [Bacillus mycoides strain JAS1004]
GTGGAGAAAATTAAAGTATGTCTTGTGGATGATAATAAAGAATTGGTATCGATGCTAGAGAGTTATGTTGCTGCCCAAGA
TGATATGGAAGTTATCGGAATTGCTTACAATGGTCAAGAATGTTTAAACTTATTGAAAGAAAAGCAGCCTGATATACTCG
TTTTAGACATTATTATGCCACATTTAGATGGTCTAGCTGTGCTAGAGAAAATGCGACATATTGAAAGGTTAAGACAACCT
AGCGTTATTATGTTGACAGCATTCGGACAAGAAGATGTGACGAAAAAAGCGGTTGATTTAGGGGCATCATATTTCATATT
AAAACCATTTGATATGGAGAATTTAACAAGTCATATTCGTCAAGTTAGTGGTAAGGAAAGTGCTACTATTAAACGTCCAT
TACCATCTTTCCGATCAGCAACAACGATAGATGGAAAACCGAAAAACTTAGATGCGAGTATTACAAGTATCATTCATGAA
ATTGGTGTACCCGCTCATATTAAAGGGTACATGTACTTACGAGAAGCAATCTCTATGGTGTACAATGATATTGAATTACT
AGGATCTATTACGAAAGTATTATATCCAGATATTGCAAAGAAATATAATACAACAGCAAGCCGTGTCGAGCGCGCAATCC
GTCACGCAATTGAAGTAGCTTGGAGCCGTGGGAATATTGATTCTATTTCGTCCTTATTTGGTTATACTGTATCCATGTCA
AAAGCAAAACCTACGAATTCTGAGTTCATCGCAATGGTTGCGGATAAGCTAAGACTTGAACATAAGGCTTCGTAA

Domains

Predicted by InterproScan.

Sporulation initiation factor Spo0A C terminal (Spo0A_C)

(154-257)

Response regulator receiver domain (Response_reg)

(6-119)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB R8I3Q7

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0A Bacillus subtilis subsp. subtilis str. 168

80.899

100

0.818

Multiple sequence alignment