Detailed information
Bioinformatically predicted
Overview
| Name | sinR | Type | Regulator |
| Locus tag | EXW59_RS11575 | Genome accession | NZ_CP036084 |
| Coordinates | 1359594..1359917 (-) | Length | 107 a.a. |
| NCBI ID | WP_002011473.1 | Uniprot ID | A0A366GDN4 |
| Organism | Bacillus mycoides strain JAS1004 | ||
| Function | repression of rok; repression of degU; repression of spo0A (predicted from homology) Competence regulation |
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Genomic Context
Location: 1354594..1364917
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EXW59_RS11550 (EXW59_11870) | - | 1354775..1356061 (+) | 1287 | WP_098635425.1 | D-alanyl-D-alanine carboxypeptidase family protein | - |
| EXW59_RS11555 (EXW59_11875) | sipW | 1356258..1356827 (+) | 570 | WP_002064334.1 | signal peptidase I SipW | - |
| EXW59_RS11560 (EXW59_11880) | - | 1356894..1357481 (+) | 588 | WP_002030432.1 | CalY family protein | - |
| EXW59_RS11565 (EXW59_11885) | - | 1357643..1358476 (+) | 834 | WP_002168858.1 | DUF4047 domain-containing protein | - |
| EXW59_RS11570 (EXW59_11890) | calY | 1358918..1359511 (+) | 594 | WP_098635424.1 | biofilm matrix protein CalY | - |
| EXW59_RS11575 (EXW59_11895) | sinR | 1359594..1359917 (-) | 324 | WP_002011473.1 | helix-turn-helix domain-containing protein | Regulator |
| EXW59_RS11580 (EXW59_11900) | - | 1359997..1360131 (-) | 135 | WP_002011474.1 | anti-repressor SinI family protein | - |
| EXW59_RS11585 (EXW59_11905) | inhA1 | 1360474..1362861 (+) | 2388 | WP_088292732.1 | M6 family metalloprotease immune inhibitor InhA1 | - |
| EXW59_RS11590 (EXW59_11910) | - | 1363032..1364399 (+) | 1368 | WP_098635423.1 | aldehyde dehydrogenase | - |
Sequence
Protein
Download Length: 107 a.a. Molecular weight: 12304.07 Da Isoelectric Point: 7.2050
>NTDB_id=346524 EXW59_RS11575 WP_002011473.1 1359594..1359917(-) (sinR) [Bacillus mycoides strain JAS1004]
MIGERIKRLRLQKGISLTELAEKAGVAKSYISSIERNLQKNPSIQFLEKIAAVLQIPVDTLLHDETTTESHLDSEWTQLV
KDAMSSGVSKEQFREFLEFTQWKKNQQ
MIGERIKRLRLQKGISLTELAEKAGVAKSYISSIERNLQKNPSIQFLEKIAAVLQIPVDTLLHDETTTESHLDSEWTQLV
KDAMSSGVSKEQFREFLEFTQWKKNQQ
Nucleotide
Download Length: 324 bp
>NTDB_id=346524 EXW59_RS11575 WP_002011473.1 1359594..1359917(-) (sinR) [Bacillus mycoides strain JAS1004]
ATGATAGGAGAACGTATAAAACGCCTTCGTTTACAAAAAGGCATTTCATTAACAGAACTCGCCGAAAAAGCTGGTGTCGC
TAAATCTTACATTAGTTCTATAGAACGGAATTTACAAAAAAACCCTTCTATTCAGTTTCTTGAAAAAATTGCAGCTGTTC
TACAAATTCCAGTTGATACTTTACTTCACGATGAAACAACAACGGAAAGTCATCTAGACTCCGAATGGACACAGCTCGTT
AAAGATGCGATGAGCTCTGGTGTCTCAAAAGAACAGTTTCGTGAATTTCTCGAATTTACACAATGGAAGAAAAATCAACA
ATAA
ATGATAGGAGAACGTATAAAACGCCTTCGTTTACAAAAAGGCATTTCATTAACAGAACTCGCCGAAAAAGCTGGTGTCGC
TAAATCTTACATTAGTTCTATAGAACGGAATTTACAAAAAAACCCTTCTATTCAGTTTCTTGAAAAAATTGCAGCTGTTC
TACAAATTCCAGTTGATACTTTACTTCACGATGAAACAACAACGGAAAGTCATCTAGACTCCGAATGGACACAGCTCGTT
AAAGATGCGATGAGCTCTGGTGTCTCAAAAGAACAGTTTCGTGAATTTCTCGAATTTACACAATGGAAGAAAAATCAACA
ATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| sinR | Bacillus subtilis subsp. subtilis str. 168 |
66.972 |
100 |
0.682 |