Detailed information NTG0346519

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: GII88_RS13170
• Genome accession: NZ_CP045814
• Coordinates: 2522367..2523497 (-)
• Length: 376 a.a.
• NCBI ID: WP_009327959.1
• Uniprot ID: Q65HV9
• Organism: Bacillus licheniformis strain P8_B2
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 2517367..2528497

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
GII88_RS13150 (GII88_13150)	-	2518556..2518900 (-)	345	WP_003183123.1	hypothetical protein	-
GII88_RS13155 (GII88_13155)	-	2519163..2521349 (-)	2187	WP_011198084.1	RNA ligase	-
GII88_RS13160 (GII88_13160)	-	2521476..2521913 (-)	438	WP_003183127.1	Hsp20/alpha crystallin family protein	-
GII88_RS13165 (GII88_13165)	-	2522072..2522377 (-)	306	WP_003183128.1	hypothetical protein	-
GII88_RS13170 (GII88_13170)	rapC	2522367..2523497 (-)	1131	WP_009327959.1	Rap family tetratricopeptide repeat protein	Regulator
GII88_RS13175 (GII88_13175)	-	2523729..2524166 (-)	438	WP_003183133.1	peptidylprolyl isomerase	-
GII88_RS13180 (GII88_13180)	-	2524503..2525399 (+)	897	WP_026080757.1	DUF1002 domain-containing protein	-
GII88_RS13185 (GII88_13185)	-	2525396..2526256 (-)	861	WP_003183139.1	poly-gamma-glutamate hydrolase family protein	-
GII88_RS13190 (GII88_13190)	lysA	2526495..2527814 (-)	1320	WP_003183141.1	diaminopimelate decarboxylase	-

Sequence

Protein

• Length: 376 a.a.
• Molecular weight: 44264.11 Da
• Isoelectric Point: 4.7199

>NTDB_id=346519 GII88_RS13170 WP_009327959.1 2522367..2523497(-) (rapC) [Bacillus licheniformis strain P8_B2]
MSVKIPSTAVGVKINDWYNAIRKFNVTDAEMLKAEIEREISQMEEDQDLLLYYALMEFRHRIMLDYVKPLEEGETPPDFS
EILKDIEDEQGKLTGLLEYYFNFFRGMYEYKNHDYIKAISFYRRAEKKLLHVEDEIERAEFHFKMAEVFYHMKQSHVSMN
YALQAIETYQAHETYTVRRIQCEFVIAGNYDDLESNEKALSHLEKALKLSQQEGQLILEGHTYYNLGNCYYKMGDFDQAA
EYFNRAAAIYQEESSDILPKAFFSLALAYFKLKQLEKADDALNKGIDIARRSDDAIYLSKFHFLKALYVDDDGRAPMLET
FQLLGSKKMYPDIEDLALEAAEYYNEIGRLSDSVYFYQTVFSARKQMKKGDWSYEI

Nucleotide

• Length: 1131 bp

>NTDB_id=346519 GII88_RS13170 WP_009327959.1 2522367..2523497(-) (rapC) [Bacillus licheniformis strain P8_B2]
GTGAGCGTAAAAATCCCATCGACGGCAGTCGGCGTAAAAATTAATGACTGGTATAACGCGATACGTAAATTCAACGTCAC
GGACGCCGAAATGCTGAAGGCAGAAATTGAGCGCGAAATTTCTCAAATGGAAGAGGATCAAGACTTATTATTGTATTACG
CCTTAATGGAATTCAGACACAGAATCATGCTTGATTACGTAAAACCTTTGGAAGAAGGCGAAACCCCGCCTGACTTTTCT
GAAATATTAAAAGATATCGAAGATGAACAAGGAAAGCTGACAGGCCTGCTCGAATATTATTTTAACTTTTTTAGAGGGAT
GTATGAATATAAAAACCATGATTATATTAAAGCGATCTCTTTTTACAGGCGCGCCGAAAAAAAGCTGCTGCACGTCGAGG
ACGAAATAGAGAGAGCCGAGTTTCATTTTAAAATGGCTGAAGTGTTTTATCATATGAAACAGAGCCATGTGTCGATGAAC
TATGCGCTTCAAGCGATTGAAACCTATCAGGCGCATGAAACCTACACGGTTCGGAGAATCCAATGCGAGTTCGTCATCGC
AGGGAACTATGACGATTTAGAGTCGAATGAAAAAGCGCTGTCACATCTTGAAAAGGCGCTGAAGCTTTCACAGCAAGAAG
GCCAGCTCATATTGGAAGGACACACCTATTACAATTTGGGAAACTGCTATTATAAGATGGGGGATTTCGATCAGGCAGCC
GAGTACTTCAACAGGGCTGCTGCGATTTATCAAGAAGAGTCATCAGATATTCTTCCAAAAGCGTTTTTCAGTCTTGCACT
TGCATATTTCAAGTTGAAGCAGCTGGAAAAGGCGGATGACGCGTTAAACAAAGGAATTGACATCGCCCGCCGATCAGACG
ATGCGATCTACCTTTCAAAATTTCATTTTTTAAAAGCTTTGTATGTTGATGATGACGGCAGGGCTCCAATGCTGGAGACA
TTTCAGCTGCTCGGGTCAAAAAAGATGTATCCCGATATTGAGGACTTGGCATTGGAAGCAGCTGAATACTATAATGAAAT
TGGGCGCTTGAGCGACTCTGTTTATTTCTATCAAACGGTATTCAGTGCTCGAAAACAAATGAAAAAAGGGGACTGGTCGT
ATGAAATCTAA

Domains

Predicted by InterProScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (4-65)

• Tetratricopeptide repeat (TPR_8) (260-290)

• Tetratricopeptide repeat (TPR_12) (190-252)

3D structure

• AlphaFold DB: Q65HV9

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	47.745	100	0.479
rapF	Bacillus subtilis subsp. subtilis str. 168	44.619	100	0.452