Detailed information
Bioinformatically predicted
Overview
| Name | pilH | Type | Machinery gene |
| Locus tag | GII88_RS09090 | Genome accession | NZ_CP045814 |
| Coordinates | 1777185..1777547 (+) | Length | 120 a.a. |
| NCBI ID | WP_003181796.1 | Uniprot ID | A0A6I1MJA4 |
| Organism | Bacillus licheniformis strain P8_B2 | ||
| Function | type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 1772185..1782547
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GII88_RS09060 (GII88_09060) | flgD | 1773029..1773496 (+) | 468 | WP_003181782.1 | flagellar hook assembly protein FlgD | - |
| GII88_RS09065 (GII88_09065) | flgG | 1773524..1774315 (+) | 792 | WP_003181784.1 | flagellar basal body rod protein FlgG | - |
| GII88_RS09070 (GII88_09070) | - | 1774358..1774573 (+) | 216 | WP_003181786.1 | flagellar FlbD family protein | - |
| GII88_RS09075 (GII88_09075) | fliL | 1774570..1775001 (+) | 432 | WP_009328514.1 | flagellar basal body-associated protein FliL | - |
| GII88_RS09080 (GII88_09080) | fliM | 1775037..1776035 (+) | 999 | WP_003181789.1 | flagellar motor switch protein FliM | - |
| GII88_RS09085 (GII88_09085) | fliY | 1776025..1777158 (+) | 1134 | WP_003181794.1 | flagellar motor switch phosphatase FliY | - |
| GII88_RS09090 (GII88_09090) | pilH | 1777185..1777547 (+) | 363 | WP_003181796.1 | response regulator | Machinery gene |
| GII88_RS09095 (GII88_09095) | fliZ | 1777617..1778234 (+) | 618 | WP_228767680.1 | flagella biosynthesis regulatory protein FliZ | - |
| GII88_RS09100 (GII88_09100) | fliP | 1778227..1778892 (+) | 666 | WP_009328512.1 | flagellar type III secretion system pore protein FliP | - |
| GII88_RS09105 (GII88_09105) | fliQ | 1778908..1779177 (+) | 270 | WP_003181801.1 | flagellar biosynthesis protein FliQ | - |
| GII88_RS09110 (GII88_09110) | fliR | 1779185..1779961 (+) | 777 | WP_003181804.1 | flagellar biosynthetic protein FliR | - |
| GII88_RS09115 (GII88_09115) | flhB | 1779961..1781040 (+) | 1080 | WP_003181806.1 | flagellar biosynthesis protein FlhB | - |
Sequence
Protein
Download Length: 120 a.a. Molecular weight: 13280.60 Da Isoelectric Point: 4.5762
>NTDB_id=346496 GII88_RS09090 WP_003181796.1 1777185..1777547(+) (pilH) [Bacillus licheniformis strain P8_B2]
MAYKILVVDDAAFMRMMIKDILVKNGFEVVAEAQDGAQAVEKYKEHSPDLVTMDITMPEKDGITALKEIKEIDPQAKIIM
CSAMGQQSMVIDAIQAGAKDFIVKPFQADRVMEAINKTLS
MAYKILVVDDAAFMRMMIKDILVKNGFEVVAEAQDGAQAVEKYKEHSPDLVTMDITMPEKDGITALKEIKEIDPQAKIIM
CSAMGQQSMVIDAIQAGAKDFIVKPFQADRVMEAINKTLS
Nucleotide
Download Length: 363 bp
>NTDB_id=346496 GII88_RS09090 WP_003181796.1 1777185..1777547(+) (pilH) [Bacillus licheniformis strain P8_B2]
ATGGCTTACAAGATTTTAGTAGTTGATGATGCAGCATTTATGAGAATGATGATTAAAGATATTTTGGTGAAAAACGGCTT
TGAAGTCGTCGCAGAAGCGCAAGACGGGGCACAGGCTGTTGAAAAGTATAAAGAGCATTCACCTGATCTTGTCACAATGG
ATATCACGATGCCGGAAAAAGACGGAATCACGGCTCTTAAAGAAATCAAGGAAATCGATCCGCAGGCAAAAATCATCATG
TGTTCGGCAATGGGCCAGCAATCGATGGTTATCGACGCCATCCAGGCGGGAGCGAAAGACTTTATCGTCAAACCGTTCCA
GGCTGACCGCGTCATGGAAGCCATCAATAAAACGCTAAGCTAA
ATGGCTTACAAGATTTTAGTAGTTGATGATGCAGCATTTATGAGAATGATGATTAAAGATATTTTGGTGAAAAACGGCTT
TGAAGTCGTCGCAGAAGCGCAAGACGGGGCACAGGCTGTTGAAAAGTATAAAGAGCATTCACCTGATCTTGTCACAATGG
ATATCACGATGCCGGAAAAAGACGGAATCACGGCTCTTAAAGAAATCAAGGAAATCGATCCGCAGGCAAAAATCATCATG
TGTTCGGCAATGGGCCAGCAATCGATGGTTATCGACGCCATCCAGGCGGGAGCGAAAGACTTTATCGTCAAACCGTTCCA
GGCTGACCGCGTCATGGAAGCCATCAATAAAACGCTAAGCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilH | Synechocystis sp. PCC 6803 |
38.136 |
98.333 |
0.375 |