Detailed information NTG0346493

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: GII88_RS08900
• Genome accession: NZ_CP045814
• Coordinates: 1744100..1745086 (+)
• Length: 328 a.a.
• NCBI ID: WP_003181713.1
• Uniprot ID: Q65JQ3
• Organism: Bacillus licheniformis strain P8_B2
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1739100..1750086

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
GII88_RS08885 (GII88_08885)	acpP	1739299..1739532 (+)	234	WP_003181706.1	acyl carrier protein	-
GII88_RS08890 (GII88_08890)	rnc	1739674..1740423 (+)	750	WP_009328527.1	ribonuclease III	-
GII88_RS08895 (GII88_08895)	smc	1740523..1744083 (+)	3561	WP_153915763.1	chromosome segregation protein SMC	-
GII88_RS08900 (GII88_08900)	pilA	1744100..1745086 (+)	987	WP_003181713.1	signal recognition particle-docking protein FtsY	Machinery gene
GII88_RS08905 (GII88_08905)	-	1745220..1745543 (+)	324	WP_003181715.1	putative DNA-binding protein	-
GII88_RS08910 (GII88_08910)	ffh	1745559..1746899 (+)	1341	WP_003181717.1	signal recognition particle protein	-
GII88_RS08915 (GII88_08915)	rpsP	1747007..1747279 (+)	273	WP_003181719.1	30S ribosomal protein S16	-
GII88_RS08920 (GII88_08920)	-	1747279..1747524 (+)	246	WP_003181721.1	KH domain-containing protein	-
GII88_RS08925 (GII88_08925)	-	1747662..1748048 (+)	387	WP_003181722.1	YlqD family protein	-
GII88_RS08930 (GII88_08930)	rimM	1748053..1748577 (+)	525	WP_003181725.1	ribosome maturation factor RimM	-
GII88_RS08935 (GII88_08935)	trmD	1748574..1749305 (+)	732	WP_003181726.1	tRNA (guanosine(37)-N1)-methyltransferase TrmD	-
GII88_RS08940 (GII88_08940)	rplS	1749444..1749791 (+)	348	WP_003181728.1	50S ribosomal protein L19	-

Sequence

Protein

• Length: 328 a.a.
• Molecular weight: 36247.39 Da
• Isoelectric Point: 4.8125

>NTDB_id=346493 GII88_RS08900 WP_003181713.1 1744100..1745086(+) (pilA) [Bacillus licheniformis strain P8_B2]
MSFFKKLKEKITQQTDSVSGKFKEGLAKTRNTFQERVNELVSRYRKVDEDFFEELEEVLIGADVGVATVMELIDELKSEV
KRRNIQDPKEVQSVISEKLVEIYEGGEQEASELRVEDGRLNIILFVGVNGVGKTTTIGKLAHQFIKEGKNVVLAAGDTFR
AGAIDQLEVWGERVGAHVVKQAEGSDPAAVIYDAVQAAKARGADVLLCDTAGRLQNKVNLMKELEKVKRVIQREVPDAPH
EVLLVLDATTGQNAMTQAREFSKATDVSGIVLTKLDGTAKGGIVLAIRHELQIPVKFVGLGEKMDDLQPFEAESYVYGLF
SDLIEKEE

Nucleotide

• Length: 987 bp

>NTDB_id=346493 GII88_RS08900 WP_003181713.1 1744100..1745086(+) (pilA) [Bacillus licheniformis strain P8_B2]
ATGAGCTTTTTTAAAAAACTGAAAGAAAAAATCACACAGCAGACCGATTCGGTCTCAGGCAAATTTAAAGAAGGCCTGGC
GAAAACGAGAAATACGTTTCAGGAGCGGGTCAATGAGCTTGTCTCCCGCTACCGGAAAGTGGACGAGGATTTTTTTGAAG
AGCTTGAAGAGGTTCTGATCGGCGCTGATGTCGGCGTTGCGACTGTTATGGAGCTGATTGACGAGCTGAAGAGCGAGGTC
AAGCGAAGAAATATTCAGGACCCGAAAGAGGTGCAGTCCGTCATTTCTGAAAAGCTCGTTGAAATCTATGAAGGCGGGGA
GCAGGAAGCATCAGAGCTCCGCGTCGAAGACGGCCGCCTAAACATCATTTTATTCGTCGGCGTCAACGGCGTCGGCAAAA
CGACGACGATCGGCAAGCTTGCCCATCAATTCATTAAAGAAGGCAAAAATGTCGTTCTTGCTGCCGGAGATACATTCAGG
GCCGGCGCGATCGACCAGCTTGAAGTGTGGGGAGAGCGCGTCGGCGCGCATGTCGTCAAACAGGCGGAAGGCTCGGATCC
TGCGGCTGTTATCTATGACGCCGTTCAAGCCGCGAAAGCGCGCGGCGCCGATGTCCTGCTTTGCGACACGGCAGGACGCC
TGCAAAATAAAGTGAACTTAATGAAAGAGCTAGAAAAGGTAAAGCGCGTGATTCAGCGCGAAGTGCCTGATGCGCCTCAT
GAAGTGCTGCTCGTACTGGATGCGACGACAGGGCAGAACGCAATGACACAGGCGCGCGAATTTTCCAAAGCGACTGATGT
CTCAGGCATCGTGCTGACGAAGCTCGACGGAACGGCAAAAGGCGGCATCGTCCTCGCCATCCGCCATGAGCTGCAGATTC
CGGTCAAGTTTGTCGGGCTGGGGGAAAAAATGGATGACCTGCAGCCGTTTGAAGCAGAGTCATATGTATACGGCCTGTTT
TCCGATCTGATCGAGAAAGAAGAGTAG

Domains

Predicted by InterProScan.

• SRP54-type protein, GTPase domain (SRP54) (121-320)

• SRP54-type protein, helical bundle domain (SRP54_N) (34-99)

3D structure

• AlphaFold DB: Q65JQ3

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	44.04	92.073	0.405