Detailed information
Bioinformatically predicted
Overview
| Name | sinR | Type | Regulator |
| Locus tag | EXW45_RS06620 | Genome accession | NZ_CP036073 |
| Coordinates | 1290845..1291168 (-) | Length | 107 a.a. |
| NCBI ID | WP_000578881.1 | Uniprot ID | A0A1C4ASA2 |
| Organism | Bacillus wiedmannii strain JAS08/1 | ||
| Function | repression of rok; repression of degU; repression of spo0A (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1285845..1296168
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EXW45_RS06595 (EXW45_06675) | - | 1286189..1287475 (+) | 1287 | WP_097993800.1 | D-alanyl-D-alanine carboxypeptidase family protein | - |
| EXW45_RS06600 (EXW45_06680) | sipW | 1287667..1288236 (+) | 570 | WP_046958253.1 | signal peptidase I SipW | - |
| EXW45_RS06605 (EXW45_06685) | - | 1288299..1288886 (+) | 588 | WP_046958252.1 | CalY family protein | - |
| EXW45_RS06610 (EXW45_06690) | - | 1289021..1289878 (+) | 858 | WP_215594415.1 | DUF4047 domain-containing protein | - |
| EXW45_RS06615 (EXW45_06695) | calY | 1290176..1290769 (+) | 594 | WP_000053728.1 | biofilm matrix protein CalY | - |
| EXW45_RS06620 (EXW45_06700) | sinR | 1290845..1291168 (-) | 324 | WP_000578881.1 | helix-turn-helix domain-containing protein | Regulator |
| EXW45_RS06625 (EXW45_06705) | - | 1291248..1291382 (-) | 135 | WP_000276217.1 | anti-repressor SinI family protein | - |
| EXW45_RS06630 (EXW45_06710) | inhA1 | 1291724..1294111 (+) | 2388 | WP_097916419.1 | M6 family metalloprotease immune inhibitor InhA1 | - |
| EXW45_RS06635 (EXW45_06715) | - | 1294283..1295650 (+) | 1368 | WP_097916417.1 | aldehyde dehydrogenase | - |
Sequence
Protein
Download Length: 107 a.a. Molecular weight: 12368.20 Da Isoelectric Point: 8.5805
>NTDB_id=346477 EXW45_RS06620 WP_000578881.1 1290845..1291168(-) (sinR) [Bacillus wiedmannii strain JAS08/1]
MIGERIKRLRLQKGISLTELAEKAGVAKSYISSIERNLQKNPSIQFLEKIAAVLQIPVDTLLHDETTKENHLDSEWTQLV
KDAMSSGVSKEQFREFLEFTKWKHDQK
MIGERIKRLRLQKGISLTELAEKAGVAKSYISSIERNLQKNPSIQFLEKIAAVLQIPVDTLLHDETTKENHLDSEWTQLV
KDAMSSGVSKEQFREFLEFTKWKHDQK
Nucleotide
Download Length: 324 bp
>NTDB_id=346477 EXW45_RS06620 WP_000578881.1 1290845..1291168(-) (sinR) [Bacillus wiedmannii strain JAS08/1]
ATGATTGGAGAACGTATAAAACGCCTTCGCTTACAAAAAGGTATTTCATTAACTGAACTTGCCGAAAAAGCTGGTGTTGC
TAAATCTTACATTAGTTCTATAGAACGAAATTTACAAAAAAACCCTTCCATTCAGTTTCTTGAAAAGATCGCAGCAGTTC
TACAAATTCCAGTTGACACTCTACTTCATGATGAAACAACAAAGGAGAATCATTTAGACTCCGAATGGACACAACTCGTT
AAAGATGCGATGAGCTCCGGCGTCTCCAAAGAACAATTTCGTGAATTTCTTGAATTTACAAAATGGAAGCACGATCAAAA
ATAA
ATGATTGGAGAACGTATAAAACGCCTTCGCTTACAAAAAGGTATTTCATTAACTGAACTTGCCGAAAAAGCTGGTGTTGC
TAAATCTTACATTAGTTCTATAGAACGAAATTTACAAAAAAACCCTTCCATTCAGTTTCTTGAAAAGATCGCAGCAGTTC
TACAAATTCCAGTTGACACTCTACTTCATGATGAAACAACAAAGGAGAATCATTTAGACTCCGAATGGACACAACTCGTT
AAAGATGCGATGAGCTCCGGCGTCTCCAAAGAACAATTTCGTGAATTTCTTGAATTTACAAAATGGAAGCACGATCAAAA
ATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| sinR | Bacillus subtilis subsp. subtilis str. 168 |
67.89 |
100 |
0.692 |