Detailed information    

insolico Bioinformatically predicted

Overview


Name   mecA   Type   Regulator
Locus tag   EXW45_RS06215 Genome accession   NZ_CP036073
Coordinates   1213597..1214280 (+) Length   227 a.a.
NCBI ID   WP_098953844.1    Uniprot ID   -
Organism   Bacillus wiedmannii strain JAS08/1     
Function   degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context


Location: 1208597..1219280
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EXW45_RS06195 (EXW45_06270) - 1209663..1211309 (+) 1647 WP_215594406.1 peptide ABC transporter substrate-binding protein -
  EXW45_RS06200 (EXW45_06275) - 1211337..1211540 (-) 204 WP_000559978.1 hypothetical protein -
  EXW45_RS06205 (EXW45_06280) spx 1212135..1212530 (+) 396 WP_000258267.1 transcriptional regulator Spx -
  EXW45_RS06210 (EXW45_06285) - 1212580..1213254 (-) 675 WP_000362605.1 TerC family protein -
  EXW45_RS06215 (EXW45_06290) mecA 1213597..1214280 (+) 684 WP_098953844.1 adaptor protein MecA Regulator
  EXW45_RS06220 (EXW45_06295) - 1214353..1215897 (+) 1545 WP_000799209.1 cardiolipin synthase -
  EXW45_RS06225 (EXW45_06300) - 1215978..1217222 (+) 1245 WP_097994399.1 competence protein CoiA family protein -
  EXW45_RS06230 (EXW45_06305) pepF 1217273..1219099 (+) 1827 WP_097917812.1 oligoendopeptidase F Regulator

Sequence


Protein


Download         Length: 227 a.a.        Molecular weight: 26979.05 Da        Isoelectric Point: 4.0019

>NTDB_id=346475 EXW45_RS06215 WP_098953844.1 1213597..1214280(+) (mecA) [Bacillus wiedmannii strain JAS08/1]
MDIERINDHTMKFFITYIDIEDRGFNREEIWYDRERSEELFWEMMDEARDHDEFFIDGPLWIQVQAVDKGIEVLVTKAEL
SKDGQKLELPIGVDKIIDIPLDEGIESLFQQELVEEVEEQAGTNFNEDGTFGFLIKFNDFEDVISLSHRLIFEDIKDELY
SFENRYYVYVEFDEVLHDEEEIDRILSIVLEYGEESTLTIHRVSEYGKQIVKEHALETIRNNFPAKT

Nucleotide


Download         Length: 684 bp        

>NTDB_id=346475 EXW45_RS06215 WP_098953844.1 1213597..1214280(+) (mecA) [Bacillus wiedmannii strain JAS08/1]
TTGGATATTGAAAGAATTAATGACCATACGATGAAATTTTTTATTACGTACATTGATATAGAGGATAGAGGGTTTAATCG
TGAAGAAATTTGGTATGACCGCGAACGAAGTGAAGAGCTCTTTTGGGAGATGATGGACGAAGCTCGTGATCATGATGAGT
TCTTTATTGATGGACCGTTATGGATTCAAGTGCAAGCAGTCGATAAAGGGATTGAAGTACTTGTAACGAAAGCAGAGCTT
TCAAAGGATGGACAAAAGCTAGAACTACCAATAGGTGTAGATAAAATTATAGACATTCCTCTAGATGAAGGCATTGAATC
ATTATTCCAGCAAGAATTAGTGGAAGAGGTAGAGGAACAAGCAGGAACAAACTTTAACGAAGATGGTACGTTTGGATTTT
TAATTAAATTTAATGATTTTGAAGATGTCATTTCATTAAGCCACCGTCTTATCTTTGAAGATATAAAAGATGAGCTGTAT
TCATTTGAGAACCGCTATTATGTATATGTGGAATTCGATGAAGTGCTACATGATGAAGAAGAAATTGATCGTATTTTAAG
TATTGTTTTAGAATACGGAGAAGAATCAACTTTAACAATTCATCGTGTAAGTGAGTATGGGAAACAAATTGTGAAAGAGC
ATGCGCTTGAAACAATTCGCAATAATTTTCCTGCTAAAACGTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mecA Bacillus subtilis subsp. subtilis str. 168

57.018

100

0.573


Multiple sequence alignment