Detailed information NTG0346453

Bioinformatically predicted

Overview

• Name: comFA
• Type: Machinery gene
• Locus tag: EXW41_RS25265
• Genome accession: NZ_CP036070
• Coordinates: 4915461..4916810 (-)
• Length: 449 a.a.
• NCBI ID: WP_215558973.1
• Uniprot ID: -
• Organism: Bacillus wiedmannii strain JAS07/5
• Function: ssDNA transport into the cell (predicted from homology) DNA binding and uptake

Genomic Context

Location: 4910461..4921810

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EXW41_RS25245 (EXW41_25590)	secA	4910779..4913286 (-)	2508	WP_048542521.1	preprotein translocase subunit SecA	-
EXW41_RS25250 (EXW41_25595)	raiA	4913562..4914104 (-)	543	WP_000671189.1	ribosome-associated translation inhibitor RaiA	-
EXW41_RS25255 (EXW41_25600)	cspC	4914433..4914630 (-)	198	WP_001990088.1	cold shock protein CspC	-
EXW41_RS25260 (EXW41_25605)	-	4914757..4915461 (-)	705	WP_215558972.1	ComF family protein	-
EXW41_RS25265 (EXW41_25610)	comFA	4915461..4916810 (-)	1350	WP_215558973.1	ATP-dependent helicase ComFA	Machinery gene
EXW41_RS25270 (EXW41_25615)	-	4916938..4918372 (-)	1435	Protein_4949	NlpC/P60 family protein	-
EXW41_RS25275 (EXW41_25620)	-	4918519..4918833 (-)	315	WP_000400858.1	helix-turn-helix domain-containing protein	-
EXW41_RS25280 (EXW41_25625)	-	4919006..4919848 (-)	843	WP_088064804.1	DegV family protein	-
EXW41_RS25285 (EXW41_25630)	-	4920088..4920723 (+)	636	WP_000926678.1	YigZ family protein	-

Sequence

Protein

• Length: 449 a.a.
• Molecular weight: 51145.88 Da
• Isoelectric Point: 9.7689

>NTDB_id=346453 EXW41_RS25265 WP_215558973.1 4915461..4916810(-) (comFA) [Bacillus wiedmannii strain JAS07/5]
MLTGKQLLLEELSSDLRDTLQDLKKKREVVCVQGVKKKASKYMCQRCGNIEQRLFASFLCKRCSKVCTYCRKCITMGRVS
ECAVLVRGIAERKGEKGINSLQWNGTLSTGQDLAAQGVIEAIKKKDSFFIWAVCGAGKTEMLFYGMEEALRKGERVCIAT
PRTDVVLELAPRLQKVFPNVNVASLYGGSEDRDKDAALVVATTHQLLRYYRAFHVMIVDEIDAFPYHADQMLQYAVQQAM
KEKAARIYLTATPDEKWKRNFRSGKQKGIIVSGRYYRHPLPVPLFCWCGNWKKSLHQKKIPRFLLQWLEMYVSKKYPIFL
FVPHVRYIEELSLILKTLDPRIDGVHAEDAMRKEKVAAFRKGEIPLLVTTTILERGVTVKNLQVAVLGAEEEIFSESALV
QIAGRAGRSFEEPYGEVVYFHCGKTEAMVRAKRHIQSMNKKAKEQGLID

Nucleotide

• Length: 1350 bp

>NTDB_id=346453 EXW41_RS25265 WP_215558973.1 4915461..4916810(-) (comFA) [Bacillus wiedmannii strain JAS07/5]
ATGTTAACAGGGAAACAGTTACTATTAGAGGAACTCTCTTCAGATTTACGGGATACATTACAAGATTTGAAAAAGAAGAG
AGAGGTCGTATGTGTACAAGGTGTAAAAAAGAAAGCTTCTAAATATATGTGTCAGCGCTGCGGAAATATAGAGCAGCGAT
TATTTGCGTCATTTTTATGTAAAAGGTGCAGTAAAGTATGTACGTATTGCCGGAAGTGTATAACGATGGGAAGAGTTAGT
GAATGTGCTGTACTCGTTCGTGGGATCGCTGAAAGAAAAGGAGAAAAAGGTATAAATTCGTTACAGTGGAACGGGACCTT
GTCTACTGGTCAGGATTTGGCAGCGCAAGGTGTTATAGAAGCTATTAAGAAGAAAGACTCTTTTTTTATTTGGGCTGTGT
GCGGGGCTGGAAAAACTGAAATGCTATTTTACGGTATGGAAGAGGCATTGCGAAAAGGAGAAAGGGTTTGTATCGCAACG
CCAAGAACAGACGTTGTACTAGAATTAGCGCCGAGATTACAAAAAGTGTTTCCAAATGTAAATGTAGCGTCCTTATACGG
AGGAAGTGAAGATAGGGACAAAGATGCAGCGTTAGTCGTTGCAACGACTCATCAATTGTTACGTTACTATAGAGCGTTTC
ATGTCATGATTGTAGATGAGATCGATGCCTTCCCGTATCATGCGGATCAAATGTTGCAGTATGCAGTGCAACAAGCGATG
AAAGAGAAAGCAGCGCGTATTTATTTAACTGCAACTCCAGATGAAAAGTGGAAGCGTAATTTCAGAAGCGGGAAACAAAA
AGGTATCATTGTCTCTGGACGATACTATCGTCATCCGTTACCAGTTCCTCTATTTTGCTGGTGCGGAAATTGGAAGAAAA
GCCTCCATCAGAAAAAAATCCCTCGATTTTTACTACAATGGTTAGAAATGTACGTAAGCAAAAAGTATCCCATTTTTTTA
TTTGTTCCTCATGTGCGATATATAGAAGAATTGAGCCTGATATTGAAAACGTTGGATCCTAGAATCGATGGTGTACATGC
AGAAGATGCGATGAGAAAAGAAAAAGTAGCAGCTTTCAGAAAGGGAGAAATTCCGTTATTAGTTACAACGACAATTTTAG
AGAGAGGAGTAACTGTGAAGAATTTACAAGTTGCGGTGTTAGGGGCGGAAGAAGAAATCTTTTCAGAAAGTGCGCTTGTA
CAAATTGCAGGCCGAGCAGGTCGTAGTTTTGAAGAACCTTATGGCGAGGTCGTTTATTTTCATTGCGGTAAGACAGAGGC
GATGGTACGCGCGAAAAGGCATATTCAAAGTATGAACAAAAAGGCGAAAGAACAAGGATTAATCGATTAA

Domains

Predicted by InterproScan.

• Helicase conserved C-terminal domain (Helicase_C) (312-408)

• Type III restriction enzyme, res subunit (ResIII) (108-254)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comFA	Bacillus subtilis subsp. subtilis str. 168	49.774	98.441	0.49
comFA	Latilactobacillus sakei subsp. sakei 23K	40.199	89.755	0.361