Detailed information NTG0346390

Bioinformatically predicted

Overview

• Name: rarA
• Type: Machinery gene
• Locus tag: GII89_RS14860
• Genome accession: NZ_CP045812
• Coordinates: 2811922..2813187 (+)
• Length: 421 a.a.
• NCBI ID: WP_004398500.1
• Uniprot ID: O34528
• Organism: Bacillus subtilis strain P8_B3
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2806922..2818187

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
GII89_RS14840 (GII89_14840)	yrrB	2808293..2808913 (-)	621	WP_010886584.1	tetratricopeptide repeat protein	-
GII89_RS14845 (GII89_14845)	mnmA	2808999..2810114 (-)	1116	WP_004398509.1	tRNA 2-thiouridine(34) synthase MnmA	-
GII89_RS14850 (GII89_14850)	iscSA	2810145..2811284 (-)	1140	WP_003246057.1	cysteine desulfurase family protein	-
GII89_RS14855 (GII89_14855)	cymR	2811303..2811719 (-)	417	WP_003225879.1	cysteine metabolism transcriptional regulator CymR	-
GII89_RS14860 (GII89_14860)	rarA	2811922..2813187 (+)	1266	WP_004398500.1	replication-associated recombination protein A	Machinery gene
GII89_RS14865 (GII89_14865)	tcdA	2813229..2813993 (-)	765	WP_009967893.1	tRNA threonylcarbamoyladenosine dehydratase	-
GII89_RS14875 (GII89_14875)	aspS	2814329..2816107 (-)	1779	WP_003229758.1	aspartate--tRNA ligase	-
GII89_RS14880 (GII89_14880)	hisS	2816121..2817395 (-)	1275	WP_003229755.1	histidine--tRNA ligase	-
GII89_RS14885 (GII89_14885)	yrzK	2817777..2817947 (-)	171	WP_004399157.1	YrzK family protein	-

Sequence

Protein

• Length: 421 a.a.
• Molecular weight: 46514.38 Da
• Isoelectric Point: 7.2043

>NTDB_id=346390 GII89_RS14860 WP_004398500.1 2811922..2813187(+) (rarA) [Bacillus subtilis strain P8_B3]
MKPLAYRMRPTKIEDIIGQQHLVAEDKIIGRMVQAKHLSSMILYGPPGIGKTSIATAIAGSTSIAFRKLNAVINNKKDME
IVAQEAKMSGQVILILDEVHRLDKGKQDFLLPYLENGMIILIGATTANPYHAINPAIRSRTQIFELEPLTPELIKQALER
ALHDEHRGLGTYSVSIDDQAMEHFAHGCGGDVRSALNALELAVLSTKESADGEIHITLETAEECLQKKSFSHDKDGDAHY
DVLSAFQKSIRGSDANAALHYLARLIEAGDLESIARRLLVIAYEDIGLASPQAGPRVLNAIQTAERVGFPEARIPLANAV
IELCLSPKSNSAILAIDEALADIRAGKIGDVPKHLKDAHYKGAQELGRGIDYKYPHNYDNGWVEQQYLPDPLKNKQYYKP
KQTGKFESALKQVYDKLMKRK

Nucleotide

• Length: 1266 bp

>NTDB_id=346390 GII89_RS14860 WP_004398500.1 2811922..2813187(+) (rarA) [Bacillus subtilis strain P8_B3]
ATGAAGCCATTGGCATATCGGATGCGTCCGACAAAAATAGAGGATATTATCGGCCAGCAGCATCTGGTGGCTGAAGATAA
AATTATTGGCAGAATGGTCCAGGCAAAACATTTGTCATCCATGATTTTGTACGGGCCGCCCGGAATTGGAAAAACATCAA
TCGCAACAGCAATCGCCGGTTCAACAAGTATTGCTTTTCGAAAGCTGAATGCTGTCATTAACAATAAAAAAGATATGGAA
ATCGTAGCTCAGGAAGCCAAGATGTCCGGCCAAGTGATTTTGATTCTGGATGAAGTCCACAGGCTGGATAAAGGAAAACA
GGATTTTCTATTACCCTATTTAGAAAACGGAATGATCATTTTGATCGGAGCAACGACGGCTAACCCGTATCATGCCATTA
ATCCGGCGATCAGAAGCCGGACCCAGATTTTTGAGCTTGAACCGTTAACACCTGAACTGATTAAACAGGCACTGGAACGT
GCGCTCCATGATGAGCATCGGGGCCTTGGCACCTATTCTGTATCCATTGATGATCAGGCGATGGAGCATTTTGCCCACGG
ATGCGGAGGAGATGTCCGCTCCGCTTTAAATGCGCTTGAGCTTGCCGTGTTGTCAACGAAGGAGTCAGCAGACGGTGAAA
TTCACATTACATTAGAAACCGCGGAAGAATGCTTGCAGAAAAAAAGCTTTTCTCACGATAAAGATGGTGACGCGCATTAT
GATGTACTGTCCGCTTTTCAAAAATCAATCCGCGGCTCTGATGCCAACGCTGCTCTTCACTATTTGGCTAGATTAATTGA
AGCCGGTGATCTGGAGAGCATCGCAAGACGATTGCTTGTTATCGCCTATGAGGATATCGGTTTAGCAAGCCCGCAAGCCG
GCCCTAGAGTGCTGAACGCTATTCAGACCGCTGAGCGAGTCGGGTTTCCTGAAGCGCGAATCCCGCTGGCCAACGCAGTT
ATTGAGCTTTGCCTCTCACCGAAATCAAACTCTGCCATTCTGGCAATCGATGAGGCCCTGGCAGATATCAGAGCCGGAAA
AATTGGGGATGTCCCGAAGCATTTAAAAGACGCGCATTATAAAGGAGCTCAGGAATTAGGAAGAGGAATCGACTATAAAT
ACCCGCACAATTACGACAACGGTTGGGTCGAACAACAATACCTCCCTGATCCTCTGAAAAATAAGCAATACTATAAGCCG
AAACAGACTGGAAAGTTCGAATCTGCCTTAAAGCAGGTGTACGATAAATTAATGAAAAGAAAATAA

Domains

Predicted by InterProScan.

• AAA C-terminal domain (AAA_assoc_2) (172-251)

• Holliday junction DNA helicase RuvB P-loop domain (RuvB_N) (8-125)

• MgsA AAA+ ATPase C terminal (MgsA_C) (252-417)

3D structure

• AlphaFold DB: O34528

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rarA	Bacillus subtilis subsp. subtilis str. 168	100	100	1