Detailed information
Bioinformatically predicted
Overview
| Name | abrB | Type | Regulator |
| Locus tag | EXW39_RS10285 | Genome accession | NZ_CP036064 |
| Coordinates | 2033797..2034084 (+) | Length | 95 a.a. |
| NCBI ID | WP_002012401.1 | Uniprot ID | A0A366G1Y4 |
| Organism | Bacillus mycoides strain JAS06/3 | ||
| Function | repression of comK; repression of rok (predicted from homology) Competence regulation |
||
Genomic Context
Location: 2028797..2039084
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EXW39_RS10265 (EXW39_10425) | - | 2029979..2030179 (+) | 201 | WP_002031430.1 | DUF4083 domain-containing protein | - |
| EXW39_RS10270 (EXW39_10430) | - | 2030207..2030668 (+) | 462 | WP_002141378.1 | NUDIX hydrolase | - |
| EXW39_RS10275 (EXW39_10435) | nadE | 2030714..2031532 (-) | 819 | WP_002031433.1 | ammonia-dependent NAD(+) synthetase | - |
| EXW39_RS10280 (EXW39_10440) | - | 2031797..2033677 (+) | 1881 | WP_002031435.1 | ABC transporter permease | - |
| EXW39_RS10285 (EXW39_10445) | abrB | 2033797..2034084 (+) | 288 | WP_002012401.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Regulator |
| EXW39_RS10290 (EXW39_10450) | - | 2034419..2035369 (+) | 951 | WP_137077392.1 | serine protease | - |
| EXW39_RS10295 (EXW39_10455) | - | 2035410..2035718 (-) | 309 | WP_002012403.1 | helix-turn-helix transcriptional regulator | - |
| EXW39_RS10300 (EXW39_10460) | - | 2035825..2036760 (+) | 936 | WP_215591172.1 | aldo/keto reductase | - |
| EXW39_RS10305 (EXW39_10465) | - | 2036780..2036983 (+) | 204 | WP_002012406.1 | hypothetical protein | - |
| EXW39_RS10310 (EXW39_10470) | - | 2037014..2037238 (-) | 225 | WP_002012407.1 | hypothetical protein | - |
| EXW39_RS10315 (EXW39_10475) | - | 2037323..2037670 (-) | 348 | WP_000426320.1 | DUF4257 domain-containing protein | - |
| EXW39_RS10320 (EXW39_10480) | - | 2037867..2038394 (+) | 528 | WP_002168592.1 | DinB family protein | - |
Sequence
Protein
Download Length: 95 a.a. Molecular weight: 10647.42 Da Isoelectric Point: 6.9795
>NTDB_id=346382 EXW39_RS10285 WP_002012401.1 2033797..2034084(+) (abrB) [Bacillus mycoides strain JAS06/3]
MKATGIIRKVDELGRIVIPKELRDVLGIQIKSPLEIFVEEDKVILQKYQPYNACQITGDVSDQNISLANGNITVSIEGAK
HVIKEIEQFLNKSKI
MKATGIIRKVDELGRIVIPKELRDVLGIQIKSPLEIFVEEDKVILQKYQPYNACQITGDVSDQNISLANGNITVSIEGAK
HVIKEIEQFLNKSKI
Nucleotide
Download Length: 288 bp
>NTDB_id=346382 EXW39_RS10285 WP_002012401.1 2033797..2034084(+) (abrB) [Bacillus mycoides strain JAS06/3]
ATGAAAGCAACAGGAATTATTCGAAAAGTAGATGAATTGGGACGGATAGTTATTCCTAAAGAATTACGAGATGTATTAGG
AATACAAATCAAATCACCACTTGAAATTTTTGTAGAAGAAGACAAAGTCATTTTACAAAAATATCAACCTTACAATGCTT
GTCAAATAACAGGTGATGTTTCAGACCAAAATATTTCATTAGCAAATGGAAACATTACTGTTAGTATAGAAGGCGCAAAA
CATGTAATAAAAGAAATTGAGCAGTTTTTGAACAAGAGTAAGATTTAG
ATGAAAGCAACAGGAATTATTCGAAAAGTAGATGAATTGGGACGGATAGTTATTCCTAAAGAATTACGAGATGTATTAGG
AATACAAATCAAATCACCACTTGAAATTTTTGTAGAAGAAGACAAAGTCATTTTACAAAAATATCAACCTTACAATGCTT
GTCAAATAACAGGTGATGTTTCAGACCAAAATATTTCATTAGCAAATGGAAACATTACTGTTAGTATAGAAGGCGCAAAA
CATGTAATAAAAGAAATTGAGCAGTTTTTGAACAAGAGTAAGATTTAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| abrB | Bacillus subtilis subsp. subtilis str. 168 |
56.383 |
98.947 |
0.558 |