Detailed information
Bioinformatically predicted
Overview
| Name | sinR | Type | Regulator |
| Locus tag | EXW39_RS06615 | Genome accession | NZ_CP036064 |
| Coordinates | 1309877..1310200 (-) | Length | 107 a.a. |
| NCBI ID | WP_002030429.1 | Uniprot ID | A0A084J505 |
| Organism | Bacillus mycoides strain JAS06/3 | ||
| Function | repression of rok; repression of degU; repression of spo0A (predicted from homology) Competence regulation |
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Genomic Context
Location: 1304877..1315200
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EXW39_RS06590 (EXW39_06735) | - | 1305024..1306310 (+) | 1287 | WP_215590955.1 | D-alanyl-D-alanine carboxypeptidase family protein | - |
| EXW39_RS06595 (EXW39_06740) | sipW | 1306508..1307077 (+) | 570 | WP_002064334.1 | signal peptidase I SipW | - |
| EXW39_RS06600 (EXW39_06745) | - | 1307142..1307729 (+) | 588 | WP_063217402.1 | CalY family protein | - |
| EXW39_RS06605 (EXW39_06750) | - | 1307894..1308763 (+) | 870 | WP_215590956.1 | DUF4047 domain-containing protein | - |
| EXW39_RS06610 (EXW39_06755) | calY | 1309201..1309794 (+) | 594 | WP_002030430.1 | biofilm matrix protein CalY | - |
| EXW39_RS06615 (EXW39_06760) | sinR | 1309877..1310200 (-) | 324 | WP_002030429.1 | helix-turn-helix domain-containing protein | Regulator |
| EXW39_RS06620 (EXW39_06765) | - | 1310280..1310414 (-) | 135 | WP_002011474.1 | anti-repressor SinI family protein | - |
| EXW39_RS06625 (EXW39_06770) | inhA1 | 1310757..1313144 (+) | 2388 | WP_088292732.1 | M6 family metalloprotease immune inhibitor InhA1 | - |
| EXW39_RS06630 (EXW39_06775) | - | 1313315..1314682 (+) | 1368 | WP_098635423.1 | aldehyde dehydrogenase | - |
Sequence
Protein
Download Length: 107 a.a. Molecular weight: 12274.04 Da Isoelectric Point: 7.2050
>NTDB_id=346379 EXW39_RS06615 WP_002030429.1 1309877..1310200(-) (sinR) [Bacillus mycoides strain JAS06/3]
MIGERIKRLRLQKGISLTELAEKAGVAKSYISSIERNLQKNPSIQFLEKIAAVLQIPVDTLLHDETTTEGHLDSEWTQLV
KDAMSSGVSKEQFREFLEFTQWKKNQQ
MIGERIKRLRLQKGISLTELAEKAGVAKSYISSIERNLQKNPSIQFLEKIAAVLQIPVDTLLHDETTTEGHLDSEWTQLV
KDAMSSGVSKEQFREFLEFTQWKKNQQ
Nucleotide
Download Length: 324 bp
>NTDB_id=346379 EXW39_RS06615 WP_002030429.1 1309877..1310200(-) (sinR) [Bacillus mycoides strain JAS06/3]
ATGATAGGAGAACGTATAAAACGCCTTCGTTTACAAAAAGGCATTTCATTAACAGAACTCGCCGAAAAAGCTGGTGTCGC
TAAATCTTACATTAGTTCTATAGAACGGAATTTACAAAAAAACCCTTCTATTCAGTTTCTTGAAAAAATTGCAGCTGTTC
TACAAATTCCAGTTGATACTTTACTTCACGATGAAACAACAACGGAGGGTCATCTAGACTCCGAATGGACACAGCTCGTT
AAAGATGCGATGAGCTCTGGTGTCTCAAAAGAACAGTTTCGTGAATTTCTCGAATTTACACAATGGAAGAAAAATCAACA
ATAA
ATGATAGGAGAACGTATAAAACGCCTTCGTTTACAAAAAGGCATTTCATTAACAGAACTCGCCGAAAAAGCTGGTGTCGC
TAAATCTTACATTAGTTCTATAGAACGGAATTTACAAAAAAACCCTTCTATTCAGTTTCTTGAAAAAATTGCAGCTGTTC
TACAAATTCCAGTTGATACTTTACTTCACGATGAAACAACAACGGAGGGTCATCTAGACTCCGAATGGACACAGCTCGTT
AAAGATGCGATGAGCTCTGGTGTCTCAAAAGAACAGTTTCGTGAATTTCTCGAATTTACACAATGGAAGAAAAATCAACA
ATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| sinR | Bacillus subtilis subsp. subtilis str. 168 |
67.89 |
100 |
0.692 |