Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   EXW39_RS06005 Genome accession   NZ_CP036064
Coordinates   1194375..1194551 (+) Length   58 a.a.
NCBI ID   WP_002011319.1    Uniprot ID   A0A366GET8
Organism   Bacillus mycoides strain JAS06/3     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 1189375..1199551
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EXW39_RS05985 (EXW39_06110) clpB 1189702..1192302 (+) 2601 WP_215590914.1 ATP-dependent chaperone ClpB -
  EXW39_RS05990 (EXW39_06115) - 1192336..1192518 (-) 183 WP_001211111.1 YjzD family protein -
  EXW39_RS05995 (EXW39_06120) - 1192674..1193408 (+) 735 WP_215590915.1 alpha/beta hydrolase -
  EXW39_RS06000 (EXW39_06125) - 1193438..1194310 (+) 873 WP_215590916.1 NAD(P)-dependent oxidoreductase -
  EXW39_RS06005 (EXW39_06130) comZ 1194375..1194551 (+) 177 WP_002011319.1 ComZ family protein Regulator
  EXW39_RS06010 (EXW39_06135) fabH 1194973..1195905 (+) 933 WP_001100550.1 beta-ketoacyl-ACP synthase III -
  EXW39_RS06015 (EXW39_06140) fabF 1195937..1197175 (+) 1239 WP_061688962.1 beta-ketoacyl-ACP synthase II -
  EXW39_RS06020 (EXW39_06145) - 1197291..1198082 (+) 792 WP_215590917.1 DUF2268 domain-containing putative Zn-dependent protease -
  EXW39_RS06025 (EXW39_06150) - 1198224..1198970 (+) 747 WP_215590918.1 YjbA family protein -

Sequence

Protein


Download         Length: 58 a.a.        Molecular weight: 6491.67 Da        Isoelectric Point: 4.6653

>NTDB_id=346374 EXW39_RS06005 WP_002011319.1 1194375..1194551(+) (comZ) [Bacillus mycoides strain JAS06/3]
MNEKSMQFLQIAMKHLPEAKAILDSNGIALDMEKAQPVLELLMKVMGEAYELGKADKE

Nucleotide


Download         Length: 177 bp        

>NTDB_id=346374 EXW39_RS06005 WP_002011319.1 1194375..1194551(+) (comZ) [Bacillus mycoides strain JAS06/3]
ATGAACGAAAAAAGTATGCAATTTTTACAAATCGCAATGAAGCATTTACCAGAAGCAAAGGCAATTTTAGATTCTAATGG
AATTGCACTTGATATGGAGAAAGCACAGCCGGTGTTAGAGCTATTGATGAAAGTAATGGGCGAAGCATATGAGCTTGGGA
AAGCAGATAAAGAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(3-57)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A366GET8

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

61.818

94.828

0.586

Multiple sequence alignment