Detailed information NTG0346355

Bioinformatically predicted

Overview

• Name: recF
• Type: Machinery gene
• Locus tag: EXW44_RS26100
• Genome accession: NZ_CP036057
• Coordinates: 5093372..5094499 (+)
• Length: 375 a.a.
• NCBI ID: WP_002016486.1
• Uniprot ID: -
• Organism: Bacillus mycoides strain JAS06/1
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 5088372..5099499

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EXW44_RS26070 (EXW44_26410)	spoIIIJ	5088408..5089175 (-)	768	WP_002130197.1	YidC family membrane integrase SpoIIIJ	-
EXW44_RS26075 (EXW44_26415)	rnpA	5089228..5089575 (-)	348	WP_002089963.1	ribonuclease P protein component	-
EXW44_RS26080 (EXW44_26420)	rpmH	5089652..5089786 (-)	135	WP_000831901.1	50S ribosomal protein L34	-
EXW44_RS26085 (EXW44_26425)	dnaA	5090350..5091690 (+)	1341	WP_002016481.1	chromosomal replication initiator protein DnaA	-
EXW44_RS26090 (EXW44_26430)	dnaN	5091873..5093018 (+)	1146	WP_002130198.1	DNA polymerase III subunit beta	-
EXW44_RS26095 (EXW44_26435)	yaaA	5093147..5093359 (+)	213	WP_002016484.1	S4 domain-containing protein YaaA	-
EXW44_RS26100 (EXW44_26440)	recF	5093372..5094499 (+)	1128	WP_002016486.1	DNA replication/repair protein RecF	Machinery gene
EXW44_RS26105 (EXW44_26445)	gyrB	5094538..5096460 (+)	1923	WP_002034986.1	DNA topoisomerase (ATP-hydrolyzing) subunit B	-
EXW44_RS26110 (EXW44_26450)	gyrA	5096549..5099020 (+)	2472	WP_002016488.1	DNA gyrase subunit A	-

Sequence

Protein

• Length: 375 a.a.
• Molecular weight: 43500.76 Da
• Isoelectric Point: 6.8418

>NTDB_id=346355 EXW44_RS26100 WP_002016486.1 5093372..5094499(+) (recF) [Bacillus mycoides strain JAS06/1]
MFITEIQLKNYRNYEHLELSFEDKVNVIIGENAQGKTNLMEAIYVLAMAKSHRTSNDRELIRWDEDYGNIKGRLQRRNSS
VSLELNISKKGKKAKLNQLEQQKLSQYIGEMNVVMFAPEDLNLVKGSPQVRRRFLDMELGQIAPVYLYELSQYQKVLTQR
NHLLKKMQGNSKNEETMLDVFTLQLIEHGAKILRKRFEFLHLLQEWAAPIHRGISRGLEELEIVYKPSVDVSESMDLSKI
KEVYYESFQSVKQREIFRGTTLLGPHRDDLQFFVNSKNVQVFGSQGQQRTTALSLKLAEIELIYSEVKEYPILLLDDVLS
ELDDYRQSHLLNTIQGKVQTFVTTTSVEGIEHETLKEAKTIHVTNGTVDCEIDRK

Nucleotide

• Length: 1128 bp

>NTDB_id=346355 EXW44_RS26100 WP_002016486.1 5093372..5094499(+) (recF) [Bacillus mycoides strain JAS06/1]
TTGTTTATTACAGAAATACAATTAAAAAACTATCGCAATTATGAGCATTTAGAGCTTTCCTTTGAGGATAAAGTCAATGT
AATTATTGGTGAAAATGCGCAAGGGAAAACGAATCTGATGGAAGCTATTTATGTATTGGCGATGGCGAAATCTCATAGAA
CTTCGAACGATCGTGAACTCATTCGTTGGGATGAGGATTATGGTAATATAAAAGGTAGATTACAAAGGCGAAATAGTTCA
GTATCCTTAGAATTAAATATTTCAAAAAAAGGTAAAAAGGCAAAGTTAAATCAGTTAGAACAACAAAAATTGAGCCAGTA
TATTGGTGAAATGAATGTTGTTATGTTTGCCCCAGAAGATTTAAATCTTGTAAAAGGAAGCCCTCAAGTACGAAGACGCT
TTTTGGATATGGAACTTGGACAAATAGCTCCGGTCTATTTGTATGAATTAAGTCAATATCAAAAGGTACTCACGCAACGA
AATCATTTACTTAAGAAGATGCAAGGGAATAGTAAAAATGAGGAAACGATGTTGGATGTATTTACACTTCAACTTATTGA
GCATGGTGCAAAAATTTTGCGAAAACGTTTTGAGTTTTTGCATTTACTACAAGAATGGGCTGCTCCAATTCATCGCGGAA
TTAGCAGGGGATTAGAGGAGTTAGAAATCGTTTATAAACCAAGTGTAGATGTATCAGAATCAATGGATTTGTCGAAAATA
AAGGAAGTATACTATGAAAGTTTTCAATCTGTGAAACAACGTGAAATTTTTCGGGGTACAACTTTACTTGGTCCTCATCG
TGATGATTTACAATTCTTCGTTAATAGTAAAAATGTTCAAGTCTTTGGTTCACAAGGACAACAACGAACAACCGCACTAT
CCCTAAAATTGGCTGAAATTGAATTGATATACTCAGAGGTTAAGGAATATCCAATTCTTTTACTAGATGATGTGTTATCA
GAATTAGATGATTATCGTCAATCGCATCTGCTAAATACAATTCAAGGAAAAGTACAAACCTTTGTGACAACGACGAGTGT
CGAGGGAATTGAACACGAAACATTGAAAGAAGCGAAAACAATTCATGTAACGAACGGCACGGTAGATTGTGAAATAGACA
GAAAATAA

Domains

Predicted by InterproScan.

• RecF/RecN/SMC N terminal domain (SMC_N) (2-351)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recF	Bacillus subtilis subsp. subtilis str. 168	66.848	98.133	0.656