Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0A   Type   Regulator
Locus tag   EXW64_RS20695 Genome accession   NZ_CP036052
Coordinates   4075360..4076154 (-) Length   264 a.a.
NCBI ID   WP_000411416.1    Uniprot ID   A0A1G4L491
Organism   Bacillus toyonensis strain JAS03/3     
Function   activation and repression of comK; repression of rok; repression of abrB (predicted from homology)   
Competence regulation

Genomic Context

Location: 4070360..4081154
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EXW64_RS20665 - 4070672..4070815 (-) 144 WP_170958066.1 hypothetical protein -
  EXW64_RS20670 (EXW64_21150) - 4070833..4071501 (-) 669 WP_098129404.1 metalloendopeptidase -
  EXW64_RS20675 (EXW64_21155) - 4071491..4071718 (-) 228 WP_098129405.1 hypothetical protein -
  EXW64_RS20680 (EXW64_21160) - 4071715..4072002 (-) 288 WP_098129406.1 helix-turn-helix transcriptional regulator -
  EXW64_RS20685 (EXW64_21165) - 4072410..4073237 (-) 828 WP_098129407.1 MerR family transcriptional regulator -
  EXW64_RS20690 (EXW64_21170) - 4074223..4075194 (-) 972 WP_098129408.1 tyrosine-type recombinase/integrase -
  EXW64_RS20695 (EXW64_21175) spo0A 4075360..4076154 (-) 795 WP_000411416.1 sporulation transcription factor Spo0A Regulator
  EXW64_RS20700 (EXW64_21185) spoIVB 4076443..4077741 (-) 1299 WP_002048975.1 SpoIVB peptidase -
  EXW64_RS20705 (EXW64_21190) recN 4077860..4079599 (-) 1740 WP_000947738.1 DNA repair protein RecN Machinery gene
  EXW64_RS20710 (EXW64_21195) argR 4079861..4080310 (-) 450 WP_001032581.1 arginine repressor ArgR -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 29427.13 Da        Isoelectric Point: 7.1176

>NTDB_id=346291 EXW64_RS20695 WP_000411416.1 4075360..4076154(-) (spo0A) [Bacillus toyonensis strain JAS03/3]
MEKIKVCLVDDNKELVSMLESYVAAQDDMEVIGTAYNGQECLNLLTDKQPDVLVLDIIMPHLDGLAVLEKMRHIERLRQP
SVIMLTAFGQEDVTKKAVDLGASYFILKPFDMENLTSHIRQVSGKANATIKRPLPSFRSATTIDGKPKNLDASITSIIHE
IGVPAHIKGYMYLREAISMVYNDIELLGSITKVLYPDIAKKYNTTASRVERAIRHAIEVAWSRGNIDSISSLFGYTVSMS
KAKPTNSEFIAMVADKLRLEHKAS

Nucleotide


Download         Length: 795 bp        

>NTDB_id=346291 EXW64_RS20695 WP_000411416.1 4075360..4076154(-) (spo0A) [Bacillus toyonensis strain JAS03/3]
GTGGAGAAAATTAAAGTATGTCTTGTGGATGATAATAAAGAATTAGTATCAATGCTAGAGAGTTATGTAGCTGCTCAAGA
TGATATGGAAGTAATCGGTACTGCTTATAATGGTCAAGAGTGTTTAAACTTATTAACAGATAAGCAGCCTGATGTACTCG
TTTTAGACATTATTATGCCACATTTAGATGGTTTAGCTGTACTAGAGAAAATGCGACATATTGAAAGGTTAAGACAGCCT
AGCGTAATTATGTTAACAGCATTTGGACAAGAAGATGTGACGAAAAAAGCAGTTGACCTAGGTGCTTCATATTTCATATT
AAAACCATTTGATATGGAGAATTTAACTAGTCATATTCGTCAAGTGAGTGGCAAGGCAAATGCTACTATTAAACGTCCAT
TACCATCTTTCCGATCAGCAACAACAATAGATGGAAAACCGAAAAACTTAGATGCAAGTATTACGAGTATTATTCATGAA
ATTGGTGTACCTGCTCATATTAAAGGATACATGTACTTACGAGAAGCGATTTCTATGGTGTACAATGATATCGAATTACT
AGGGTCTATTACGAAAGTATTATATCCAGATATTGCAAAGAAATATAATACAACAGCGAGCCGTGTCGAGCGTGCAATCC
GTCACGCGATTGAAGTAGCGTGGAGCCGTGGAAATATTGATTCTATTTCGTCCTTATTTGGTTATACAGTATCCATGTCA
AAAGCAAAACCTACGAATTCTGAGTTTATCGCAATGGTTGCGGATAAGTTGAGACTTGAACATAAGGCTTCGTAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(6-119)

Sporulation initiation factor Spo0A C terminal (Spo0A_C)

(154-257)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A1G4L491

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0A Bacillus subtilis subsp. subtilis str. 168

80.524

100

0.814

Multiple sequence alignment