Detailed information
Bioinformatically predicted
Overview
| Name | abrB | Type | Regulator |
| Locus tag | EXW28_RS09715 | Genome accession | NZ_CP036046 |
| Coordinates | 1922057..1922344 (+) | Length | 95 a.a. |
| NCBI ID | WP_002012401.1 | Uniprot ID | A0A366G1Y4 |
| Organism | Bacillus mycoides strain BPN601 | ||
| Function | repression of comK; repression of rok (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1917057..1927344
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EXW28_RS09695 (EXW28_09885) | - | 1918239..1918440 (+) | 202 | Protein_1833 | DUF4083 domain-containing protein | - |
| EXW28_RS09700 (EXW28_09890) | - | 1918468..1918929 (+) | 462 | WP_002141378.1 | NUDIX hydrolase | - |
| EXW28_RS09705 (EXW28_09895) | nadE | 1918974..1919792 (-) | 819 | WP_215552495.1 | ammonia-dependent NAD(+) synthetase | - |
| EXW28_RS09710 (EXW28_09900) | - | 1920057..1921937 (+) | 1881 | WP_215552494.1 | ABC transporter permease | - |
| EXW28_RS09715 (EXW28_09905) | abrB | 1922057..1922344 (+) | 288 | WP_002012401.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Regulator |
| EXW28_RS09720 (EXW28_09910) | - | 1922677..1923627 (+) | 951 | WP_215584845.1 | S8 family peptidase | - |
| EXW28_RS09725 (EXW28_09915) | - | 1923668..1923976 (-) | 309 | WP_001259916.1 | helix-turn-helix transcriptional regulator | - |
| EXW28_RS09730 (EXW28_09920) | - | 1924084..1925019 (+) | 936 | WP_215552493.1 | aldo/keto reductase | - |
| EXW28_RS29695 (EXW28_09925) | - | 1925069..1925275 (+) | 207 | Protein_1841 | hypothetical protein | - |
| EXW28_RS09735 (EXW28_09930) | - | 1925332..1925556 (-) | 225 | WP_002141385.1 | hypothetical protein | - |
| EXW28_RS09740 (EXW28_09935) | - | 1925641..1925988 (-) | 348 | WP_000426320.1 | DUF4257 domain-containing protein | - |
| EXW28_RS09745 (EXW28_09940) | - | 1926185..1926712 (+) | 528 | WP_215552492.1 | DinB family protein | - |
Sequence
Protein
Download Length: 95 a.a. Molecular weight: 10647.42 Da Isoelectric Point: 6.9795
>NTDB_id=346231 EXW28_RS09715 WP_002012401.1 1922057..1922344(+) (abrB) [Bacillus mycoides strain BPN601]
MKATGIIRKVDELGRIVIPKELRDVLGIQIKSPLEIFVEEDKVILQKYQPYNACQITGDVSDQNISLANGNITVSIEGAK
HVIKEIEQFLNKSKI
MKATGIIRKVDELGRIVIPKELRDVLGIQIKSPLEIFVEEDKVILQKYQPYNACQITGDVSDQNISLANGNITVSIEGAK
HVIKEIEQFLNKSKI
Nucleotide
Download Length: 288 bp
>NTDB_id=346231 EXW28_RS09715 WP_002012401.1 1922057..1922344(+) (abrB) [Bacillus mycoides strain BPN601]
ATGAAAGCAACAGGAATTATTCGAAAAGTAGATGAATTGGGACGGATAGTTATTCCTAAAGAATTACGAGATGTATTAGG
AATACAAATCAAATCACCACTTGAAATTTTTGTAGAAGAAGACAAAGTCATTTTACAAAAATATCAACCTTACAATGCTT
GTCAAATAACAGGTGATGTTTCAGACCAAAATATTTCATTAGCAAATGGAAACATTACTGTTAGTATAGAAGGCGCAAAA
CATGTAATAAAAGAAATTGAGCAGTTTTTGAACAAGAGTAAGATTTAG
ATGAAAGCAACAGGAATTATTCGAAAAGTAGATGAATTGGGACGGATAGTTATTCCTAAAGAATTACGAGATGTATTAGG
AATACAAATCAAATCACCACTTGAAATTTTTGTAGAAGAAGACAAAGTCATTTTACAAAAATATCAACCTTACAATGCTT
GTCAAATAACAGGTGATGTTTCAGACCAAAATATTTCATTAGCAAATGGAAACATTACTGTTAGTATAGAAGGCGCAAAA
CATGTAATAAAAGAAATTGAGCAGTTTTTGAACAAGAGTAAGATTTAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| abrB | Bacillus subtilis subsp. subtilis str. 168 |
56.383 |
98.947 |
0.558 |