Detailed information NTG0346232

Bioinformatically predicted

Overview

• Name: rarA
• Type: Machinery gene
• Locus tag: GII90_RS13770
• Genome accession: NZ_CP045811
• Coordinates: 2659879..2661144 (+)
• Length: 421 a.a.
• NCBI ID: WP_004398500.1
• Uniprot ID: O34528
• Organism: Bacillus subtilis strain P9_B1
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2654879..2666144

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
GII90_RS13750 (GII90_13750)	yrrB	2656250..2656870 (-)	621	WP_010886584.1	tetratricopeptide repeat protein	-
GII90_RS13755 (GII90_13755)	mnmA	2656956..2658071 (-)	1116	WP_004398509.1	tRNA 2-thiouridine(34) synthase MnmA	-
GII90_RS13760 (GII90_13760)	iscSA	2658102..2659241 (-)	1140	WP_003246057.1	cysteine desulfurase family protein	-
GII90_RS13765 (GII90_13765)	cymR	2659260..2659676 (-)	417	WP_003225879.1	cysteine metabolism transcriptional regulator CymR	-
GII90_RS13770 (GII90_13770)	rarA	2659879..2661144 (+)	1266	WP_004398500.1	replication-associated recombination protein A	Machinery gene
GII90_RS13775 (GII90_13775)	tcdA	2661186..2661950 (-)	765	WP_003229763.1	tRNA threonylcarbamoyladenosine dehydratase	-
GII90_RS13785 (GII90_13785)	aspS	2662286..2664064 (-)	1779	WP_003229758.1	aspartate--tRNA ligase	-
GII90_RS13790 (GII90_13790)	hisS	2664078..2665352 (-)	1275	WP_003229755.1	histidine--tRNA ligase	-
GII90_RS13795 (GII90_13795)	yrzK	2665734..2665904 (-)	171	WP_004399157.1	YrzK family protein	-

Sequence

Protein

• Length: 421 a.a.
• Molecular weight: 46514.38 Da
• Isoelectric Point: 7.2043

>NTDB_id=346232 GII90_RS13770 WP_004398500.1 2659879..2661144(+) (rarA) [Bacillus subtilis strain P9_B1]
MKPLAYRMRPTKIEDIIGQQHLVAEDKIIGRMVQAKHLSSMILYGPPGIGKTSIATAIAGSTSIAFRKLNAVINNKKDME
IVAQEAKMSGQVILILDEVHRLDKGKQDFLLPYLENGMIILIGATTANPYHAINPAIRSRTQIFELEPLTPELIKQALER
ALHDEHRGLGTYSVSIDDQAMEHFAHGCGGDVRSALNALELAVLSTKESADGEIHITLETAEECLQKKSFSHDKDGDAHY
DVLSAFQKSIRGSDANAALHYLARLIEAGDLESIARRLLVIAYEDIGLASPQAGPRVLNAIQTAERVGFPEARIPLANAV
IELCLSPKSNSAILAIDEALADIRAGKIGDVPKHLKDAHYKGAQELGRGIDYKYPHNYDNGWVEQQYLPDPLKNKQYYKP
KQTGKFESALKQVYDKLMKRK

Nucleotide

• Length: 1266 bp

>NTDB_id=346232 GII90_RS13770 WP_004398500.1 2659879..2661144(+) (rarA) [Bacillus subtilis strain P9_B1]
ATGAAGCCATTGGCATATCGGATGCGTCCGACAAAAATAGAGGATATTATCGGCCAGCAGCATCTGGTGGCTGAAGATAA
AATTATTGGCAGAATGGTCCAGGCAAAACATTTGTCATCCATGATTTTGTACGGGCCGCCCGGAATTGGAAAAACATCAA
TCGCAACAGCAATCGCCGGTTCAACAAGTATTGCTTTTCGAAAGCTGAATGCTGTCATTAACAATAAAAAAGATATGGAA
ATCGTAGCTCAGGAAGCCAAGATGTCCGGCCAAGTGATTTTGATTCTGGATGAAGTCCACAGGCTGGATAAAGGAAAACA
GGATTTTCTATTACCCTATTTAGAAAACGGAATGATCATTTTGATCGGAGCAACGACGGCTAACCCGTATCATGCCATTA
ATCCGGCGATCAGAAGCCGGACCCAGATTTTTGAGCTTGAACCGTTAACACCTGAACTGATTAAACAGGCACTGGAACGT
GCGCTCCATGATGAGCATCGGGGCCTTGGCACCTATTCTGTATCCATTGATGATCAGGCGATGGAGCATTTTGCCCACGG
ATGCGGAGGAGATGTCCGCTCCGCTTTAAATGCGCTTGAGCTTGCCGTGTTGTCAACGAAGGAGTCAGCAGACGGTGAAA
TTCACATTACATTAGAAACCGCGGAAGAATGCTTGCAGAAAAAAAGCTTTTCTCACGATAAAGATGGTGACGCGCATTAT
GATGTACTGTCCGCTTTTCAAAAATCAATCCGCGGCTCTGATGCCAACGCTGCTCTTCACTATTTGGCTAGATTAATTGA
AGCCGGTGATCTGGAGAGCATCGCAAGACGATTGCTTGTTATCGCCTATGAGGATATCGGTTTAGCAAGCCCGCAAGCCG
GCCCTAGAGTGCTGAACGCTATTCAGACCGCTGAGCGAGTCGGGTTTCCTGAAGCGCGAATCCCGCTGGCCAACGCAGTT
ATTGAGCTTTGCCTCTCACCGAAATCAAACTCTGCCATTCTGGCAATCGATGAGGCCCTGGCAGATATCAGAGCCGGAAA
AATTGGGGATGTCCCGAAGCATTTAAAAGACGCGCATTATAAAGGAGCTCAGGAATTAGGAAGAGGAATCGACTATAAAT
ACCCGCACAATTACGACAACGGTTGGGTCGAACAACAATACCTCCCTGATCCTCTGAAAAATAAGCAATACTATAAGCCG
AAACAGACTGGAAAGTTCGAATCTGCCTTAAAGCAGGTGTACGATAAATTAATGAAAAGAAAATAA

Domains

Predicted by InterProScan.

• AAA C-terminal domain (AAA_assoc_2) (172-251)

• Holliday junction DNA helicase RuvB P-loop domain (RuvB_N) (8-125)

• MgsA AAA+ ATPase C terminal (MgsA_C) (252-417)

3D structure

• AlphaFold DB: O34528

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rarA	Bacillus subtilis subsp. subtilis str. 168	100	100	1