Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   EXW51_RS19905 Genome accession   NZ_CP036043
Coordinates   3845351..3845809 (+) Length   152 a.a.
NCBI ID   WP_002066920.1    Uniprot ID   A0A366GHE8
Organism   Bacillus mycoides strain BPN58/4     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 3840351..3850809
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EXW51_RS19890 (EXW51_20280) - 3841003..3841251 (+) 249 WP_197219404.1 hypothetical protein -
  EXW51_RS19895 (EXW51_20285) - 3841418..3843526 (-) 2109 WP_215573792.1 polyphosphate kinase -
  EXW51_RS19900 (EXW51_20290) - 3843635..3845209 (-) 1575 WP_080020910.1 Ppx/GppA family phosphatase -
  EXW51_RS19905 (EXW51_20295) kre 3845351..3845809 (+) 459 WP_002066920.1 YkyB family protein Regulator
  EXW51_RS19910 (EXW51_20300) - 3845841..3846503 (-) 663 WP_002066948.1 YkyA family protein -
  EXW51_RS19915 (EXW51_20305) - 3847056..3847709 (-) 654 WP_215573793.1 diguanylate cyclase domain-containing protein -
  EXW51_RS19920 (EXW51_20310) - 3847872..3848105 (+) 234 WP_002014824.1 phage holin -
  EXW51_RS19925 (EXW51_20315) - 3848137..3848637 (-) 501 WP_002014823.1 hypothetical protein -
  EXW51_RS19930 (EXW51_20320) - 3849192..3850733 (+) 1542 WP_002014821.1 MDR family MFS transporter -

Sequence

Protein


Download         Length: 152 a.a.        Molecular weight: 17758.44 Da        Isoelectric Point: 10.6793

>NTDB_id=346188 EXW51_RS19905 WP_002066920.1 3845351..3845809(+) (kre) [Bacillus mycoides strain BPN58/4]
MKPSQPQSQLHNQHSINRLAQSIFVVNRHAKAATNPKYLYWLKKTALERLITEKKAIKEGLHFSRNPRFSQQQSDVLIRL
GDYFFHIPPTKDDFRTLPHLGHLESSYRNPKTTLSLTIAKKTLQDYIGPEALKQEKKLSEAVPWYSRTYTKK

Nucleotide


Download         Length: 459 bp        

>NTDB_id=346188 EXW51_RS19905 WP_002066920.1 3845351..3845809(+) (kre) [Bacillus mycoides strain BPN58/4]
ATGAAACCTTCACAACCCCAATCTCAATTACATAATCAACATTCTATTAATAGACTAGCTCAATCTATTTTCGTTGTGAA
TCGTCATGCTAAAGCTGCAACTAACCCTAAGTACTTATATTGGTTAAAAAAGACTGCTTTAGAACGCTTAATTACTGAAA
AAAAGGCTATTAAAGAAGGATTACATTTTTCTAGAAATCCACGTTTTAGTCAACAACAATCCGATGTTCTTATACGTTTA
GGTGATTATTTTTTCCATATCCCTCCTACGAAAGATGATTTTCGCACCCTACCGCATCTTGGTCACCTTGAATCCTCCTA
TCGAAATCCGAAAACAACCTTATCTTTAACAATAGCAAAAAAAACACTTCAAGATTATATTGGTCCTGAAGCATTAAAAC
AAGAAAAAAAATTAAGCGAAGCAGTTCCATGGTATAGCCGTACCTATACAAAAAAATAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(16-128)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A366GHE8

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

63.793

76.316

0.487

Multiple sequence alignment