Detailed information
Bioinformatically predicted
Overview
| Name | abrB | Type | Regulator |
| Locus tag | EXW50_RS09740 | Genome accession | NZ_CP036040 |
| Coordinates | 1923871..1924158 (+) | Length | 95 a.a. |
| NCBI ID | WP_002012401.1 | Uniprot ID | A0A366G1Y4 |
| Organism | Bacillus mycoides strain BPN573 | ||
| Function | repression of comK; repression of rok (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1918871..1929158
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EXW50_RS09720 (EXW50_09925) | - | 1920054..1920254 (+) | 201 | WP_215552496.1 | DUF4083 domain-containing protein | - |
| EXW50_RS09725 (EXW50_09930) | - | 1920282..1920743 (+) | 462 | WP_002141378.1 | NUDIX hydrolase | - |
| EXW50_RS09730 (EXW50_09935) | nadE | 1920788..1921606 (-) | 819 | WP_215552495.1 | ammonia-dependent NAD(+) synthetase | - |
| EXW50_RS09735 (EXW50_09940) | - | 1921871..1923751 (+) | 1881 | WP_215552494.1 | FtsX-like permease family protein | - |
| EXW50_RS09740 (EXW50_09945) | abrB | 1923871..1924158 (+) | 288 | WP_002012401.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Regulator |
| EXW50_RS09745 (EXW50_09950) | - | 1924447..1925397 (+) | 951 | WP_002012402.1 | serine protease | - |
| EXW50_RS09750 (EXW50_09955) | - | 1925438..1925746 (-) | 309 | WP_001259916.1 | helix-turn-helix transcriptional regulator | - |
| EXW50_RS09755 (EXW50_09960) | - | 1925854..1926789 (+) | 936 | WP_215552493.1 | aldo/keto reductase | - |
| EXW50_RS29615 (EXW50_09965) | - | 1926839..1927045 (+) | 207 | Protein_1848 | hypothetical protein | - |
| EXW50_RS09760 (EXW50_09970) | - | 1927102..1927326 (-) | 225 | WP_002141385.1 | hypothetical protein | - |
| EXW50_RS09765 (EXW50_09975) | - | 1927411..1927758 (-) | 348 | WP_000426320.1 | DUF4257 domain-containing protein | - |
| EXW50_RS09770 (EXW50_09980) | - | 1927955..1928482 (+) | 528 | WP_215552492.1 | DinB family protein | - |
Sequence
Protein
Download Length: 95 a.a. Molecular weight: 10647.42 Da Isoelectric Point: 6.9795
>NTDB_id=346129 EXW50_RS09740 WP_002012401.1 1923871..1924158(+) (abrB) [Bacillus mycoides strain BPN573]
MKATGIIRKVDELGRIVIPKELRDVLGIQIKSPLEIFVEEDKVILQKYQPYNACQITGDVSDQNISLANGNITVSIEGAK
HVIKEIEQFLNKSKI
MKATGIIRKVDELGRIVIPKELRDVLGIQIKSPLEIFVEEDKVILQKYQPYNACQITGDVSDQNISLANGNITVSIEGAK
HVIKEIEQFLNKSKI
Nucleotide
Download Length: 288 bp
>NTDB_id=346129 EXW50_RS09740 WP_002012401.1 1923871..1924158(+) (abrB) [Bacillus mycoides strain BPN573]
ATGAAAGCAACAGGAATTATTCGAAAAGTAGATGAATTGGGACGGATAGTTATTCCTAAAGAATTACGAGATGTATTAGG
AATACAAATCAAATCACCACTTGAAATTTTTGTAGAAGAAGACAAAGTCATTTTACAAAAATATCAACCTTACAATGCTT
GTCAAATAACAGGTGATGTTTCAGACCAAAATATTTCATTAGCAAATGGAAACATTACTGTTAGTATAGAAGGCGCAAAA
CATGTAATAAAAGAAATTGAGCAGTTTTTGAACAAGAGTAAGATTTAG
ATGAAAGCAACAGGAATTATTCGAAAAGTAGATGAATTGGGACGGATAGTTATTCCTAAAGAATTACGAGATGTATTAGG
AATACAAATCAAATCACCACTTGAAATTTTTGTAGAAGAAGACAAAGTCATTTTACAAAAATATCAACCTTACAATGCTT
GTCAAATAACAGGTGATGTTTCAGACCAAAATATTTCATTAGCAAATGGAAACATTACTGTTAGTATAGAAGGCGCAAAA
CATGTAATAAAAGAAATTGAGCAGTTTTTGAACAAGAGTAAGATTTAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| abrB | Bacillus subtilis subsp. subtilis str. 168 |
56.383 |
98.947 |
0.558 |