Detailed information
Bioinformatically predicted
Overview
| Name | sinR | Type | Regulator |
| Locus tag | EXW50_RS06420 | Genome accession | NZ_CP036040 |
| Coordinates | 1278279..1278602 (-) | Length | 107 a.a. |
| NCBI ID | WP_002030429.1 | Uniprot ID | A0A084J505 |
| Organism | Bacillus mycoides strain BPN573 | ||
| Function | repression of rok; repression of degU; repression of spo0A (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1273279..1283602
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EXW50_RS06395 (EXW50_06575) | - | 1273392..1274678 (+) | 1287 | WP_215552728.1 | D-alanyl-D-alanine carboxypeptidase family protein | - |
| EXW50_RS06400 (EXW50_06580) | sipW | 1274876..1275445 (+) | 570 | WP_002064334.1 | signal peptidase I SipW | - |
| EXW50_RS06405 (EXW50_06585) | - | 1275508..1276095 (+) | 588 | WP_063217402.1 | CalY family protein | - |
| EXW50_RS06410 (EXW50_06590) | - | 1276260..1277165 (+) | 906 | WP_215552727.1 | DUF4047 domain-containing protein | - |
| EXW50_RS06415 (EXW50_06595) | calY | 1277604..1278197 (+) | 594 | WP_215552726.1 | biofilm matrix protein CalY | - |
| EXW50_RS06420 (EXW50_06600) | sinR | 1278279..1278602 (-) | 324 | WP_002030429.1 | helix-turn-helix domain-containing protein | Regulator |
| EXW50_RS06425 (EXW50_06605) | - | 1278682..1278816 (-) | 135 | WP_000276222.1 | anti-repressor SinI family protein | - |
| EXW50_RS06430 (EXW50_06610) | inhA1 | 1279161..1281548 (+) | 2388 | WP_215552725.1 | M6 family metalloprotease immune inhibitor InhA1 | - |
| EXW50_RS06435 (EXW50_06615) | - | 1281719..1283086 (+) | 1368 | WP_215552724.1 | aldehyde dehydrogenase | - |
Sequence
Protein
Download Length: 107 a.a. Molecular weight: 12274.04 Da Isoelectric Point: 7.2050
>NTDB_id=346126 EXW50_RS06420 WP_002030429.1 1278279..1278602(-) (sinR) [Bacillus mycoides strain BPN573]
MIGERIKRLRLQKGISLTELAEKAGVAKSYISSIERNLQKNPSIQFLEKIAAVLQIPVDTLLHDETTTEGHLDSEWTQLV
KDAMSSGVSKEQFREFLEFTQWKKNQQ
MIGERIKRLRLQKGISLTELAEKAGVAKSYISSIERNLQKNPSIQFLEKIAAVLQIPVDTLLHDETTTEGHLDSEWTQLV
KDAMSSGVSKEQFREFLEFTQWKKNQQ
Nucleotide
Download Length: 324 bp
>NTDB_id=346126 EXW50_RS06420 WP_002030429.1 1278279..1278602(-) (sinR) [Bacillus mycoides strain BPN573]
ATGATAGGAGAACGTATAAAACGCCTTCGTTTACAAAAAGGTATTTCATTAACAGAACTCGCCGAAAAAGCTGGTGTAGC
TAAATCTTACATTAGTTCTATAGAACGGAATTTACAAAAAAACCCTTCTATTCAGTTTCTTGAAAAAATTGCAGCTGTTC
TACAAATTCCAGTTGATACTTTACTTCACGATGAAACAACAACGGAGGGTCACCTAGACTCCGAATGGACACAGCTCGTT
AAAGATGCGATGAGCTCTGGTGTCTCAAAAGAACAGTTTCGTGAATTTCTCGAATTTACACAATGGAAGAAAAATCAACA
ATAA
ATGATAGGAGAACGTATAAAACGCCTTCGTTTACAAAAAGGTATTTCATTAACAGAACTCGCCGAAAAAGCTGGTGTAGC
TAAATCTTACATTAGTTCTATAGAACGGAATTTACAAAAAAACCCTTCTATTCAGTTTCTTGAAAAAATTGCAGCTGTTC
TACAAATTCCAGTTGATACTTTACTTCACGATGAAACAACAACGGAGGGTCACCTAGACTCCGAATGGACACAGCTCGTT
AAAGATGCGATGAGCTCTGGTGTCTCAAAAGAACAGTTTCGTGAATTTCTCGAATTTACACAATGGAAGAAAAATCAACA
ATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| sinR | Bacillus subtilis subsp. subtilis str. 168 |
67.89 |
100 |
0.692 |