Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   EXW50_RS05850 Genome accession   NZ_CP036040
Coordinates   1169727..1169903 (+) Length   58 a.a.
NCBI ID   WP_002011319.1    Uniprot ID   A0A366GET8
Organism   Bacillus mycoides strain BPN573     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 1164727..1174903
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EXW50_RS05830 (EXW50_05980) clpB 1165055..1167655 (+) 2601 WP_215552761.1 ATP-dependent chaperone ClpB -
  EXW50_RS05835 (EXW50_05985) - 1167687..1167869 (-) 183 WP_001211111.1 YjzD family protein -
  EXW50_RS05840 (EXW50_05990) - 1168026..1168760 (+) 735 WP_002030268.1 hydrolase -
  EXW50_RS05845 (EXW50_05995) - 1168790..1169662 (+) 873 WP_002134958.1 NAD(P)-dependent oxidoreductase -
  EXW50_RS05850 (EXW50_06000) comZ 1169727..1169903 (+) 177 WP_002011319.1 ComZ family protein Regulator
  EXW50_RS05855 (EXW50_06005) fabH 1170334..1171266 (+) 933 WP_098167263.1 beta-ketoacyl-ACP synthase III -
  EXW50_RS05860 (EXW50_06010) fabF 1171298..1172536 (+) 1239 WP_061688962.1 beta-ketoacyl-ACP synthase II -
  EXW50_RS05865 (EXW50_06015) - 1172652..1173443 (+) 792 WP_002030365.1 DUF2268 domain-containing protein -
  EXW50_RS05870 (EXW50_06020) - 1173585..1174331 (+) 747 WP_002030367.1 YjbA family protein -

Sequence

Protein


Download         Length: 58 a.a.        Molecular weight: 6491.67 Da        Isoelectric Point: 4.6653

>NTDB_id=346121 EXW50_RS05850 WP_002011319.1 1169727..1169903(+) (comZ) [Bacillus mycoides strain BPN573]
MNEKSMQFLQIAMKHLPEAKAILDSNGIALDMEKAQPVLELLMKVMGEAYELGKADKE

Nucleotide


Download         Length: 177 bp        

>NTDB_id=346121 EXW50_RS05850 WP_002011319.1 1169727..1169903(+) (comZ) [Bacillus mycoides strain BPN573]
ATGAACGAAAAAAGTATGCAATTTTTACAAATCGCAATGAAGCATTTACCAGAAGCAAAGGCAATTTTAGATTCTAATGG
AATTGCACTTGATATGGAGAAAGCACAGCCGGTGTTAGAGCTATTGATGAAAGTAATGGGCGAAGCATATGAGCTTGGGA
AAGCAGATAAAGAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(3-57)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A366GET8

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

61.818

94.828

0.586

Multiple sequence alignment