Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   EXW62_RS18435 Genome accession   NZ_CP036034
Coordinates   3675084..3675542 (+) Length   152 a.a.
NCBI ID   WP_002066920.1    Uniprot ID   A0A366GHE8
Organism   Bacillus mycoides strain BPN57/2     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 3670084..3680542
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EXW62_RS18420 (EXW62_18830) - 3670749..3670985 (+) 237 WP_002199486.1 hypothetical protein -
  EXW62_RS18425 (EXW62_18835) - 3671151..3673259 (-) 2109 WP_215554030.1 polyphosphate kinase -
  EXW62_RS18430 (EXW62_18840) - 3673368..3674942 (-) 1575 WP_215554031.1 Ppx/GppA family phosphatase -
  EXW62_RS18435 (EXW62_18845) kre 3675084..3675542 (+) 459 WP_002066920.1 YkyB family protein Regulator
  EXW62_RS18440 (EXW62_18850) - 3675574..3676236 (-) 663 WP_215554032.1 YkyA family protein -
  EXW62_RS18445 (EXW62_18855) - 3676790..3677443 (-) 654 WP_215554033.1 diguanylate cyclase -
  EXW62_RS18450 (EXW62_18860) - 3677608..3677841 (+) 234 WP_002111524.1 SPP1 phage holin family protein -
  EXW62_RS18455 (EXW62_18865) - 3677873..3678373 (-) 501 WP_215554034.1 hypothetical protein -
  EXW62_RS18460 (EXW62_18870) - 3678904..3680445 (+) 1542 WP_215554035.1 MDR family MFS transporter -

Sequence

Protein


Download         Length: 152 a.a.        Molecular weight: 17758.44 Da        Isoelectric Point: 10.6793

>NTDB_id=346086 EXW62_RS18435 WP_002066920.1 3675084..3675542(+) (kre) [Bacillus mycoides strain BPN57/2]
MKPSQPQSQLHNQHSINRLAQSIFVVNRHAKAATNPKYLYWLKKTALERLITEKKAIKEGLHFSRNPRFSQQQSDVLIRL
GDYFFHIPPTKDDFRTLPHLGHLESSYRNPKTTLSLTIAKKTLQDYIGPEALKQEKKLSEAVPWYSRTYTKK

Nucleotide


Download         Length: 459 bp        

>NTDB_id=346086 EXW62_RS18435 WP_002066920.1 3675084..3675542(+) (kre) [Bacillus mycoides strain BPN57/2]
ATGAAACCTTCACAACCCCAATCTCAATTACATAATCAACATTCTATTAATAGACTAGCTCAATCTATTTTCGTTGTGAA
TCGTCATGCTAAAGCTGCAACTAACCCTAAGTACTTATATTGGCTAAAAAAGACTGCTTTAGAACGCTTAATTACTGAAA
AAAAGGCTATCAAAGAAGGATTACATTTTTCTAGAAATCCACGTTTTAGTCAACAACAATCCGATGTTCTTATACGTTTA
GGTGATTATTTTTTCCATATCCCTCCTACGAAAGATGATTTTCGCACCCTACCGCATCTTGGTCACCTTGAATCCTCCTA
TCGAAATCCGAAAACAACCTTATCTTTAACAATAGCAAAAAAAACACTTCAAGATTATATTGGTCCTGAAGCATTAAAAC
AAGAAAAAAAATTAAGCGAAGCAGTTCCATGGTATAGCCGTACCTATACAAAAAAATAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(16-128)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A366GHE8

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

63.793

76.316

0.487

Multiple sequence alignment