Detailed information NTG0346066

Bioinformatically predicted

Overview

• Name: uvrA
• Type: Machinery gene
• Locus tag: GH799_RS05050
• Genome accession: NZ_CP045794
• Coordinates: 1002795..1005617 (-)
• Length: 940 a.a.
• NCBI ID: WP_005497272.1
• Uniprot ID: -
• Organism: Vibrio parahaemolyticus 10329
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 997795..1010617

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
GH799_RS05040 (GH799_05035)	-	999709..1000830 (+)	1122	WP_005497268.1	alanine--glyoxylate aminotransferase family protein	-
GH799_RS05045 (GH799_05040)	-	1000949..1002727 (-)	1779	WP_005497270.1	PglL family O-oligosaccharyltransferase	-
GH799_RS05050 (GH799_05045)	uvrA	1002795..1005617 (-)	2823	WP_005497272.1	excinuclease ABC subunit UvrA	Machinery gene
GH799_RS05055 (GH799_05050)	galU	1005755..1006627 (-)	873	WP_005466627.1	UTP--glucose-1-phosphate uridylyltransferase GalU	-
GH799_RS05060 (GH799_05055)	qstR	1006885..1007529 (-)	645	WP_005480993.1	LuxR C-terminal-related transcriptional regulator	Regulator
GH799_RS05065 (GH799_05060)	ssb	1007808..1008338 (+)	531	WP_005466625.1	single-stranded DNA-binding protein	Machinery gene
GH799_RS05070 (GH799_05065)	csrD	1008579..1010588 (+)	2010	WP_005497274.1	RNase E specificity factor CsrD	-

Sequence

Protein

• Length: 940 a.a.
• Molecular weight: 103898.13 Da
• Isoelectric Point: 6.5101

>NTDB_id=346066 GH799_RS05050 WP_005497272.1 1002795..1005617(-) (uvrA) [Vibrio parahaemolyticus 10329]
MDKIEVRGARTHNLKDINLTIPRDKLTVITGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQFLSLMEKPDVDHIEGLS
PAISIEQKSTSHNPRSTVGTITEVYDYLRLLYARVGEPRCPTHHAPLAAQTVSQMVDKVLELPEGSKMMLLAPIVKERKG
EHVKTLENLAAQGFIRARIDGETCDLSDPPTLELHKKHTIEVVVDRFKVRPDLQQRLAESFETTLELSGGIAVVAPMDGD
GEEIIFSANFACPQCGYSMQELEPRLFSFNNPAGACGTCDGLGVQQYFDPNRVIQDDSLSLAQGAIRGWDQKNYYYFQML
TSLADHYGFDLHAPFNSLPKKTQDVILKGSGRTEIEFKYINDRGDIRVKRHPFEGILNTLERRYRDTESNSVREELAKYI
STKSCSSCGGTRLRLEARNVFIADTTLPEIVELSIADALTFFQTLKLEGQRAQIAEKVMKEINDRLQFLVNVGLNYLNLS
RSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLKTLTHLRDLGNTVLVVEHDEDAIRCADHVIDIG
PGAGVHGGNVVAEGTMDEIIANPNSLTGQYLSGAKEIAVPKERTPRDPKKTVELLGATGNNLKNVDLSIPVGLFSCITGV
SGSGKSTLINDTFFKIAHTQLNGATTAHPSPYKSIKGLEHFDKVIDIDQSPIGRTPRSNPATYTGIFTPIRELFAGTQES
RSRGYKPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDVYVPCDVCKGKRYNRETLEVRYKGKTIDEVLEMTVEDARTFFD
PVPAIARKLQTLMDVGLSYIRLGQAATTLSGGEAQRVKLARELSKRDTGKTLYILDEPTTGLHFHDIQQLLTVLHRLRDH
GNTVVVIEHNLDVIKTADWIIDLGPEGGQGGGEIIAQGTPEDVSQIEGSHTARFLKPMLK

Nucleotide

• Length: 2823 bp

>NTDB_id=346066 GH799_RS05050 WP_005497272.1 1002795..1005617(-) (uvrA) [Vibrio parahaemolyticus 10329]
ATGGATAAAATAGAAGTTCGCGGTGCCCGAACCCATAACCTCAAAGACATCAATCTGACTATTCCTCGCGATAAACTGAC
AGTAATTACTGGGTTAAGTGGCTCCGGTAAGTCCTCTCTCGCATTCGATACCTTATATGCAGAAGGCCAACGACGTTATG
TCGAATCACTGTCTGCTTATGCTCGTCAGTTTTTGTCTCTTATGGAAAAACCAGATGTCGACCATATCGAAGGTTTATCA
CCGGCGATTTCTATTGAACAAAAATCGACATCTCATAACCCTCGCTCAACCGTCGGTACCATCACCGAAGTTTACGACTA
CTTACGTCTGCTTTACGCTCGTGTTGGTGAACCACGCTGTCCTACTCACCACGCCCCATTAGCCGCACAAACTGTCAGCC
AGATGGTGGATAAAGTATTGGAACTGCCAGAAGGCAGCAAAATGATGCTGCTTGCTCCAATCGTAAAAGAGCGCAAAGGT
GAGCATGTAAAAACACTAGAAAACCTTGCCGCACAAGGTTTTATTCGAGCGCGTATTGACGGCGAAACTTGCGATCTTTC
AGATCCTCCAACACTTGAGCTACACAAAAAACACACCATTGAAGTCGTGGTCGACCGATTCAAAGTTCGCCCAGATCTGC
AACAACGTTTAGCAGAGTCATTTGAGACGACGCTAGAGCTTTCTGGTGGTATTGCGGTGGTTGCTCCGATGGATGGCGAT
GGGGAAGAAATCATCTTTTCAGCGAACTTCGCTTGTCCGCAATGTGGCTACAGCATGCAAGAGCTGGAACCGAGATTGTT
CTCATTTAACAACCCAGCAGGCGCGTGTGGAACTTGTGATGGCTTGGGTGTACAACAGTATTTTGATCCAAACCGAGTGA
TTCAAGATGACTCACTCAGTTTGGCACAAGGTGCCATTCGTGGTTGGGATCAAAAGAATTACTATTACTTCCAAATGCTG
ACTTCATTGGCGGATCATTATGGATTTGATTTGCATGCTCCGTTCAACTCTCTGCCAAAGAAAACGCAAGACGTTATTCT
CAAAGGCTCAGGCCGCACCGAGATCGAGTTTAAATACATCAATGATCGCGGCGACATTCGTGTAAAGCGCCACCCATTCG
AAGGGATTTTAAATACGCTTGAACGTCGTTACCGCGACACCGAGTCCAACTCGGTTCGAGAAGAGTTGGCCAAATACATC
TCGACAAAATCATGCTCAAGCTGTGGCGGTACTCGTCTACGCCTTGAAGCACGTAATGTATTTATTGCCGATACCACCTT
ACCTGAGATCGTTGAGCTCAGTATTGCAGATGCCCTTACCTTCTTCCAAACACTCAAGCTAGAAGGTCAACGTGCGCAAA
TTGCAGAAAAGGTCATGAAGGAGATTAATGATCGTCTACAGTTCCTTGTAAATGTGGGCTTGAACTACCTTAATTTATCC
CGGAGTGCAGAGACGCTATCCGGTGGCGAAGCACAACGCATTCGCTTAGCGAGCCAAATTGGTGCAGGTCTTGTTGGTGT
CATGTACGTATTAGATGAACCGTCGATTGGCCTCCACCAGCGTGATAACGAACGACTCCTAAAAACACTGACTCATTTGC
GCGATTTAGGTAATACCGTACTCGTGGTAGAACACGATGAAGATGCCATTCGCTGTGCCGATCACGTGATTGATATTGGC
CCAGGAGCGGGGGTGCACGGCGGTAATGTGGTTGCCGAAGGAACCATGGACGAGATCATCGCCAACCCGAACTCTCTCAC
AGGTCAGTATCTGAGTGGCGCAAAAGAGATAGCAGTCCCTAAAGAGCGTACCCCTCGCGATCCAAAGAAAACCGTCGAGC
TACTAGGCGCAACAGGTAACAACCTGAAGAACGTCGACTTATCGATTCCTGTCGGATTGTTTAGCTGTATTACTGGCGTG
TCAGGCTCCGGTAAATCAACCTTGATCAACGATACGTTCTTCAAAATTGCACACACCCAGCTCAATGGCGCTACTACTGC
ACACCCATCGCCTTATAAGTCGATTAAAGGTCTAGAACATTTCGATAAGGTTATCGACATCGATCAAAGCCCAATTGGCC
GAACACCGCGCTCGAACCCAGCGACGTACACGGGAATCTTTACCCCTATTCGCGAGCTGTTTGCTGGTACGCAAGAATCA
CGTTCACGTGGTTACAAACCTGGCCGCTTTAGTTTTAACGTTCGTGGTGGTCGCTGTGAAGCTTGTCAGGGGGATGGTGT
TATCAAAGTCGAGATGCACTTCTTACCAGACGTGTACGTGCCATGTGATGTGTGTAAAGGTAAGCGCTATAACCGCGAAA
CACTGGAAGTACGCTACAAAGGCAAAACCATCGATGAAGTACTGGAAATGACCGTCGAGGATGCTCGCACCTTCTTCGAT
CCTGTTCCTGCGATTGCCCGCAAGCTGCAAACTCTAATGGACGTTGGTCTGTCTTACATTCGTTTAGGTCAAGCGGCAAC
CACATTATCAGGCGGCGAAGCGCAGCGAGTGAAATTGGCAAGAGAGCTATCCAAGCGTGATACGGGTAAAACCTTGTACA
TTCTAGATGAGCCAACAACTGGTCTGCACTTCCATGATATTCAGCAGCTATTAACTGTACTTCATCGCCTGCGCGATCAC
GGGAATACCGTTGTGGTTATCGAGCATAACTTGGACGTTATCAAAACAGCAGACTGGATCATCGACTTAGGACCAGAGGG
CGGACAAGGCGGCGGAGAGATCATTGCCCAGGGAACACCAGAAGATGTGTCTCAGATCGAAGGTTCGCACACAGCTCGAT
TCCTTAAGCCTATGTTGAAATAG

Domains

Predicted by InterProScan.

• UvrA interaction domain (UvrA_inter) (130-237)

• UvrA DNA-binding domain (UvrA_DNA-bind) (289-398)

• ABC transporter (ABC_tran) (622-859)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
uvrA	Streptococcus pneumoniae R6	57.749	100	0.579
uvrA	Streptococcus pneumoniae TIGR4	57.749	100	0.579
uvrA	Streptococcus pneumoniae D39	57.749	100	0.579