Detailed information
Bioinformatically predicted
Overview
| Name | abrB | Type | Regulator |
| Locus tag | EXW49_RS09805 | Genome accession | NZ_CP036023 |
| Coordinates | 1946155..1946442 (+) | Length | 95 a.a. |
| NCBI ID | WP_016102181.1 | Uniprot ID | R8HL35 |
| Organism | Bacillus mycoides strain BPN52/2 | ||
| Function | repression of comK; repression of rok (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1941155..1951442
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EXW49_RS09785 (EXW49_09920) | - | 1942338..1942538 (+) | 201 | WP_002141377.1 | DUF4083 domain-containing protein | - |
| EXW49_RS09790 (EXW49_09925) | - | 1942566..1943027 (+) | 462 | WP_002141378.1 | NUDIX hydrolase | - |
| EXW49_RS09795 (EXW49_09930) | nadE | 1943072..1943890 (-) | 819 | WP_002031433.1 | ammonia-dependent NAD(+) synthetase | - |
| EXW49_RS09800 (EXW49_09935) | - | 1944155..1946035 (+) | 1881 | WP_016102182.1 | ABC transporter permease | - |
| EXW49_RS09805 (EXW49_09940) | abrB | 1946155..1946442 (+) | 288 | WP_016102181.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Regulator |
| EXW49_RS09810 (EXW49_09945) | - | 1946777..1947727 (+) | 951 | WP_016102180.1 | serine protease | - |
| EXW49_RS09815 (EXW49_09950) | - | 1947768..1948076 (-) | 309 | WP_016102179.1 | helix-turn-helix transcriptional regulator | - |
| EXW49_RS09820 (EXW49_09955) | - | 1948184..1949119 (+) | 936 | WP_215588962.1 | aldo/keto reductase | - |
| EXW49_RS29975 (EXW49_09960) | - | 1949169..1949375 (+) | 207 | Protein_1856 | hypothetical protein | - |
| EXW49_RS09825 (EXW49_09965) | - | 1949406..1949630 (-) | 225 | WP_002141385.1 | hypothetical protein | - |
| EXW49_RS09830 (EXW49_09970) | - | 1949715..1950062 (-) | 348 | WP_000426320.1 | DUF4257 domain-containing protein | - |
| EXW49_RS09835 (EXW49_09975) | - | 1950259..1950786 (+) | 528 | WP_002168592.1 | DinB family protein | - |
Sequence
Protein
Download Length: 95 a.a. Molecular weight: 10648.36 Da Isoelectric Point: 6.9795
>NTDB_id=345979 EXW49_RS09805 WP_016102181.1 1946155..1946442(+) (abrB) [Bacillus mycoides strain BPN52/2]
MKATGIIRKVDELGRIVIPKELRDVLGIQIKSPLEIFVEEDKVILQKYQPYNACQITGDVSDQNISLANGNITVSIEGAK
HVIKEIEQFLNKSKN
MKATGIIRKVDELGRIVIPKELRDVLGIQIKSPLEIFVEEDKVILQKYQPYNACQITGDVSDQNISLANGNITVSIEGAK
HVIKEIEQFLNKSKN
Nucleotide
Download Length: 288 bp
>NTDB_id=345979 EXW49_RS09805 WP_016102181.1 1946155..1946442(+) (abrB) [Bacillus mycoides strain BPN52/2]
ATGAAAGCAACAGGAATTATTCGAAAAGTAGATGAATTGGGACGGATAGTTATTCCTAAAGAATTACGAGATGTATTAGG
AATACAAATCAAATCACCACTTGAAATTTTTGTAGAAGAAGACAAAGTCATTTTACAAAAATATCAACCTTACAATGCTT
GTCAAATAACAGGTGATGTTTCAGACCAAAATATTTCATTAGCAAATGGAAACATTACTGTTAGTATAGAAGGCGCAAAA
CATGTAATAAAAGAAATTGAGCAGTTTTTGAACAAGAGTAAGAATTAG
ATGAAAGCAACAGGAATTATTCGAAAAGTAGATGAATTGGGACGGATAGTTATTCCTAAAGAATTACGAGATGTATTAGG
AATACAAATCAAATCACCACTTGAAATTTTTGTAGAAGAAGACAAAGTCATTTTACAAAAATATCAACCTTACAATGCTT
GTCAAATAACAGGTGATGTTTCAGACCAAAATATTTCATTAGCAAATGGAAACATTACTGTTAGTATAGAAGGCGCAAAA
CATGTAATAAAAGAAATTGAGCAGTTTTTGAACAAGAGTAAGAATTAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| abrB | Bacillus subtilis subsp. subtilis str. 168 |
56.383 |
98.947 |
0.558 |