Detailed information
Bioinformatically predicted
Overview
| Name | abrB | Type | Regulator |
| Locus tag | EXW52_RS09840 | Genome accession | NZ_CP036017 |
| Coordinates | 1928135..1928422 (+) | Length | 95 a.a. |
| NCBI ID | WP_016102181.1 | Uniprot ID | R8HL35 |
| Organism | Bacillus mycoides strain BPN51/1 | ||
| Function | repression of comK; repression of rok (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1923135..1933422
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EXW52_RS09820 (EXW52_09980) | - | 1924317..1924517 (+) | 201 | WP_002141377.1 | DUF4083 domain-containing protein | - |
| EXW52_RS09825 (EXW52_09985) | - | 1924545..1925006 (+) | 462 | WP_002141378.1 | NUDIX hydrolase | - |
| EXW52_RS09830 (EXW52_09990) | nadE | 1925052..1925870 (-) | 819 | WP_002031433.1 | ammonia-dependent NAD(+) synthetase | - |
| EXW52_RS09835 (EXW52_09995) | - | 1926135..1928015 (+) | 1881 | WP_215601045.1 | FtsX-like permease family protein | - |
| EXW52_RS09840 (EXW52_10000) | abrB | 1928135..1928422 (+) | 288 | WP_016102181.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Regulator |
| EXW52_RS09845 (EXW52_10005) | - | 1928757..1929707 (+) | 951 | WP_016102180.1 | serine protease | - |
| EXW52_RS09850 (EXW52_10010) | - | 1929748..1930056 (-) | 309 | WP_016102179.1 | helix-turn-helix transcriptional regulator | - |
| EXW52_RS09855 (EXW52_10015) | - | 1930164..1931099 (+) | 936 | WP_215601046.1 | aldo/keto reductase | - |
| EXW52_RS30045 (EXW52_10020) | - | 1931149..1931355 (+) | 207 | Protein_1869 | hypothetical protein | - |
| EXW52_RS09860 (EXW52_10025) | - | 1931386..1931610 (-) | 225 | WP_002141385.1 | hypothetical protein | - |
| EXW52_RS09865 (EXW52_10030) | - | 1931695..1932042 (-) | 348 | WP_000426320.1 | DUF4257 domain-containing protein | - |
| EXW52_RS09870 (EXW52_10035) | - | 1932239..1932766 (+) | 528 | WP_002168592.1 | DinB family protein | - |
Sequence
Protein
Download Length: 95 a.a. Molecular weight: 10648.36 Da Isoelectric Point: 6.9795
>NTDB_id=345928 EXW52_RS09840 WP_016102181.1 1928135..1928422(+) (abrB) [Bacillus mycoides strain BPN51/1]
MKATGIIRKVDELGRIVIPKELRDVLGIQIKSPLEIFVEEDKVILQKYQPYNACQITGDVSDQNISLANGNITVSIEGAK
HVIKEIEQFLNKSKN
MKATGIIRKVDELGRIVIPKELRDVLGIQIKSPLEIFVEEDKVILQKYQPYNACQITGDVSDQNISLANGNITVSIEGAK
HVIKEIEQFLNKSKN
Nucleotide
Download Length: 288 bp
>NTDB_id=345928 EXW52_RS09840 WP_016102181.1 1928135..1928422(+) (abrB) [Bacillus mycoides strain BPN51/1]
ATGAAAGCAACAGGAATTATTCGAAAAGTAGATGAATTGGGACGGATAGTTATTCCTAAAGAATTACGAGATGTATTAGG
AATACAAATCAAATCACCACTTGAAATTTTTGTAGAAGAAGACAAAGTCATTTTACAAAAATATCAACCTTACAATGCTT
GTCAAATAACAGGTGATGTTTCAGACCAAAATATTTCATTAGCAAATGGAAACATTACTGTTAGTATAGAAGGCGCAAAA
CATGTAATAAAAGAAATTGAGCAGTTTTTGAACAAGAGTAAGAATTAG
ATGAAAGCAACAGGAATTATTCGAAAAGTAGATGAATTGGGACGGATAGTTATTCCTAAAGAATTACGAGATGTATTAGG
AATACAAATCAAATCACCACTTGAAATTTTTGTAGAAGAAGACAAAGTCATTTTACAAAAATATCAACCTTACAATGCTT
GTCAAATAACAGGTGATGTTTCAGACCAAAATATTTCATTAGCAAATGGAAACATTACTGTTAGTATAGAAGGCGCAAAA
CATGTAATAAAAGAAATTGAGCAGTTTTTGAACAAGAGTAAGAATTAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| abrB | Bacillus subtilis subsp. subtilis str. 168 |
56.383 |
98.947 |
0.558 |