Detailed information    

insolico Bioinformatically predicted

Overview


Name   mecA   Type   Regulator
Locus tag   EXW52_RS06035 Genome accession   NZ_CP036017
Coordinates   1193584..1194267 (+) Length   227 a.a.
NCBI ID   WP_002030378.1    Uniprot ID   A0A0A0WR99
Organism   Bacillus mycoides strain BPN51/1     
Function   degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context


Location: 1188584..1199267
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EXW52_RS06015 (EXW52_06145) - 1189567..1191213 (+) 1647 WP_002140829.1 peptide ABC transporter substrate-binding protein -
  EXW52_RS06020 (EXW52_06150) - 1191243..1191446 (-) 204 WP_000559981.1 hypothetical protein -
  EXW52_RS06025 (EXW52_06160) spx 1192026..1192421 (+) 396 WP_002011348.1 transcriptional regulator Spx -
  EXW52_RS06030 (EXW52_06165) - 1192472..1193146 (-) 675 WP_061674935.1 TerC family protein -
  EXW52_RS06035 (EXW52_06170) mecA 1193584..1194267 (+) 684 WP_002030378.1 adaptor protein MecA Regulator
  EXW52_RS06040 (EXW52_06175) - 1194340..1195884 (+) 1545 WP_061689041.1 cardiolipin synthase -
  EXW52_RS06045 (EXW52_06180) - 1195976..1197211 (+) 1236 WP_061689042.1 competence protein CoiA -
  EXW52_RS06050 (EXW52_06185) pepF 1197262..1199088 (+) 1827 WP_002134970.1 oligoendopeptidase F Regulator

Sequence


Protein


Download         Length: 227 a.a.        Molecular weight: 27043.20 Da        Isoelectric Point: 4.0116

>NTDB_id=345923 EXW52_RS06035 WP_002030378.1 1193584..1194267(+) (mecA) [Bacillus mycoides strain BPN51/1]
MDIERINDHTMKFFITYIDIEDRGFNREEIWYDRERSEELFWEMMDEARDHDDFFIDGPLWIQVQAVDKGIEVLVTKAEL
SKDGQKLELPIGVDKIIDIPLDEGIESLFQQELVEEVEEQIGTNFNEDGTFGFLIKFNDFEDVISLSHRLIFEDIKDELH
SFEDRYYVYVEFDEVLHDEEEIDRILSIVLEYGEESTLTIHRVSEYGKQVVKERALETIRNNFPPKM

Nucleotide


Download         Length: 684 bp        

>NTDB_id=345923 EXW52_RS06035 WP_002030378.1 1193584..1194267(+) (mecA) [Bacillus mycoides strain BPN51/1]
TTGGATATTGAAAGAATTAATGACCATACGATGAAATTTTTTATTACGTACATTGATATAGAGGACAGAGGGTTTAATCG
TGAAGAAATTTGGTATGATCGCGAACGAAGTGAAGAGCTCTTTTGGGAGATGATGGACGAAGCTCGTGATCATGATGATT
TCTTTATCGATGGGCCGTTATGGATCCAAGTGCAAGCAGTCGATAAAGGGATTGAAGTACTTGTAACGAAAGCGGAGCTT
TCAAAGGATGGACAAAAGCTGGAACTACCAATAGGTGTAGACAAAATTATAGACATTCCTCTAGATGAAGGCATCGAATC
ATTATTCCAGCAAGAATTAGTGGAAGAGGTAGAAGAACAAATAGGAACAAACTTTAATGAAGATGGTACGTTTGGCTTTT
TAATTAAGTTTAATGATTTTGAAGATGTTATTTCATTAAGTCATCGTCTTATCTTTGAAGATATAAAAGATGAATTACAT
TCATTTGAGGACCGATATTATGTATATGTGGAATTCGATGAAGTGCTACATGATGAAGAAGAAATTGATCGTATTTTAAG
TATTGTTTTAGAATATGGAGAAGAATCTACTTTAACGATTCACCGTGTAAGTGAGTATGGGAAACAGGTTGTGAAAGAGC
GTGCGCTTGAGACAATTCGCAACAATTTCCCTCCTAAAATGTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A0A0WR99

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mecA Bacillus subtilis subsp. subtilis str. 168

54.386

100

0.546


Multiple sequence alignment