Detailed information
Bioinformatically predicted
Overview
| Name | abrB | Type | Regulator |
| Locus tag | EXW33_RS22130 | Genome accession | NZ_CP036014 |
| Coordinates | 4321926..4322213 (+) | Length | 95 a.a. |
| NCBI ID | WP_000648323.1 | Uniprot ID | A0A1V6LCK0 |
| Organism | Bacillus toyonensis strain BPN45/4 | ||
| Function | repression of comK; repression of rok (predicted from homology) Competence regulation |
||
Genomic Context
Location: 4316926..4327213
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EXW33_RS22110 (EXW33_22650) | - | 4318008..4318205 (+) | 198 | WP_000362874.1 | DUF4083 domain-containing protein | - |
| EXW33_RS22115 (EXW33_22655) | - | 4318335..4318796 (+) | 462 | WP_215599886.1 | NUDIX hydrolase | - |
| EXW33_RS22120 (EXW33_22660) | nadE | 4318839..4319657 (-) | 819 | WP_000174902.1 | ammonia-dependent NAD(+) synthetase | - |
| EXW33_RS22125 (EXW33_22665) | - | 4319931..4321811 (+) | 1881 | WP_001026007.1 | ABC transporter permease | - |
| EXW33_RS22130 (EXW33_22670) | abrB | 4321926..4322213 (+) | 288 | WP_000648323.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Regulator |
| EXW33_RS22135 (EXW33_22675) | - | 4322474..4323424 (+) | 951 | WP_001089048.1 | serine protease | - |
| EXW33_RS22140 (EXW33_22680) | - | 4323465..4323773 (-) | 309 | WP_001259900.1 | helix-turn-helix transcriptional regulator | - |
| EXW33_RS22145 (EXW33_22685) | - | 4323882..4324817 (+) | 936 | WP_000874084.1 | aldo/keto reductase | - |
| EXW33_RS22150 (EXW33_22690) | - | 4325064..4325288 (-) | 225 | WP_000162608.1 | hypothetical protein | - |
| EXW33_RS22155 (EXW33_22695) | - | 4325373..4325720 (-) | 348 | WP_000426317.1 | DUF4257 domain-containing protein | - |
| EXW33_RS22160 (EXW33_22700) | - | 4325915..4326442 (+) | 528 | WP_001019819.1 | DinB family protein | - |
Sequence
Protein
Download Length: 95 a.a. Molecular weight: 10635.40 Da Isoelectric Point: 5.8675
>NTDB_id=345903 EXW33_RS22130 WP_000648323.1 4321926..4322213(+) (abrB) [Bacillus toyonensis strain BPN45/4]
MKATGVIRKVDELGRIVIPKELRDVLGIQIKSPLEIFVDEDKVILQKYEPYNACQITGDVSDQNISLANGNITVSIDGAK
HLIKEIEKFLKKSEI
MKATGVIRKVDELGRIVIPKELRDVLGIQIKSPLEIFVDEDKVILQKYEPYNACQITGDVSDQNISLANGNITVSIDGAK
HLIKEIEKFLKKSEI
Nucleotide
Download Length: 288 bp
>NTDB_id=345903 EXW33_RS22130 WP_000648323.1 4321926..4322213(+) (abrB) [Bacillus toyonensis strain BPN45/4]
ATGAAAGCAACAGGAGTTATTCGAAAAGTAGACGAATTAGGACGAATTGTTATTCCTAAAGAATTAAGAGATGTATTAGG
TATACAAATTAAATCACCACTTGAAATTTTCGTAGATGAAGATAAAGTCATTTTACAAAAATATGAACCTTACAATGCTT
GTCAAATAACAGGTGATGTTTCAGATCAGAACATATCATTAGCAAATGGAAACATTACTGTTAGTATAGATGGAGCGAAA
CATTTAATAAAAGAAATAGAGAAGTTTTTAAAAAAAAGTGAGATTTAG
ATGAAAGCAACAGGAGTTATTCGAAAAGTAGACGAATTAGGACGAATTGTTATTCCTAAAGAATTAAGAGATGTATTAGG
TATACAAATTAAATCACCACTTGAAATTTTCGTAGATGAAGATAAAGTCATTTTACAAAAATATGAACCTTACAATGCTT
GTCAAATAACAGGTGATGTTTCAGATCAGAACATATCATTAGCAAATGGAAACATTACTGTTAGTATAGATGGAGCGAAA
CATTTAATAAAAGAAATAGAGAAGTTTTTAAAAAAAAGTGAGATTTAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| abrB | Bacillus subtilis subsp. subtilis str. 168 |
56.044 |
95.789 |
0.537 |