Detailed information NTG0345881

Bioinformatically predicted

Overview

• Name: recF
• Type: Machinery gene
• Locus tag: EXW33_RS12480
• Genome accession: NZ_CP036014
• Coordinates: 2428871..2429998 (+)
• Length: 375 a.a.
• NCBI ID: WP_000470741.1
• Uniprot ID: A0A2B5ZTQ8
• Organism: Bacillus toyonensis strain BPN45/4
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2423871..2434998

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EXW33_RS12450 (EXW33_12750)	spoIIIJ	2423911..2424678 (-)	768	WP_000727742.1	YidC family membrane integrase SpoIIIJ	-
EXW33_RS12455 (EXW33_12755)	rnpA	2424731..2425078 (-)	348	WP_000728890.1	ribonuclease P protein component	-
EXW33_RS12460 (EXW33_12760)	rpmH	2425155..2425289 (-)	135	WP_000831901.1	50S ribosomal protein L34	-
EXW33_RS12465 (EXW33_12765)	dnaA	2425854..2427194 (+)	1341	WP_000428014.1	chromosomal replication initiator protein DnaA	-
EXW33_RS12470 (EXW33_12770)	dnaN	2427373..2428518 (+)	1146	WP_001212897.1	DNA polymerase III subunit beta	-
EXW33_RS12475 (EXW33_12775)	yaaA	2428646..2428858 (+)	213	WP_000821369.1	S4 domain-containing protein YaaA	-
EXW33_RS12480 (EXW33_12780)	recF	2428871..2429998 (+)	1128	WP_000470741.1	DNA replication/repair protein RecF	Machinery gene
EXW33_RS12485 (EXW33_12785)	gyrB	2430038..2431960 (+)	1923	WP_000435980.1	DNA topoisomerase (ATP-hydrolyzing) subunit B	-
EXW33_RS12490 (EXW33_12790)	gyrA	2432049..2434520 (+)	2472	WP_001282862.1	DNA gyrase subunit A	-

Sequence

Protein

• Length: 375 a.a.
• Molecular weight: 43320.59 Da
• Isoelectric Point: 6.5997

>NTDB_id=345881 EXW33_RS12480 WP_000470741.1 2428871..2429998(+) (recF) [Bacillus toyonensis strain BPN45/4]
MFISEIQLKNYRNYEKLELSFEDKVNVIIGENAQGKTNLMEAIYVLAMAKSHRTSNDRELIRWDEDFGQIKGKLQKRNSS
LSLELNISKKGKKAKLNQLEQQKLSQYIGEMNVVMFAPEDLNLVKGSPQVRRRFLDMELGQIAPVYLYELSQYQKVLTQR
NHLLKKMQGNSKNEETMLDVFTLQLIEHGAKILQKRFDFLHLLQEWAAPIHRGISRGLEELEIIYKPSVDVSESMDLSKI
KEVYYESFQSVKQREIFRGTTLIGPHRDDLQFFVNSKNVQVFGSQGQQRTTALSLKLAEIELIYSEVKEYPILLLDDVLS
ELDDYRQSHLLNTIQGKVQTFVTTTSVDGIEHETLKDAKTIHVTNGTVDCEIDRA

Nucleotide

• Length: 1128 bp

>NTDB_id=345881 EXW33_RS12480 WP_000470741.1 2428871..2429998(+) (recF) [Bacillus toyonensis strain BPN45/4]
TTGTTTATTTCAGAAATACAATTAAAAAACTATCGCAATTATGAAAAATTAGAGCTTTCCTTTGAAGATAAAGTGAATGT
AATTATCGGCGAAAATGCGCAAGGGAAAACAAATTTGATGGAAGCTATTTATGTGTTAGCGATGGCGAAATCTCATAGAA
CCTCCAATGACCGCGAGCTTATCCGTTGGGATGAAGATTTCGGTCAAATTAAAGGGAAATTACAAAAGAGAAATAGTTCT
TTGTCTTTAGAATTAAATATTTCGAAAAAAGGTAAAAAGGCAAAATTAAATCAACTTGAACAACAAAAGTTGAGTCAATA
TATTGGCGAAATGAATGTTGTCATGTTTGCCCCAGAAGATTTAAATCTTGTAAAAGGAAGCCCTCAAGTAAGAAGACGCT
TTTTAGATATGGAATTAGGACAAATAGCTCCTGTTTATTTGTATGAATTAAGTCAATATCAAAAAGTGCTCACGCAACGA
AACCACTTGCTAAAAAAAATGCAAGGGAATAGTAAAAATGAGGAAACGATGTTGGATGTATTTACACTGCAACTGATTGA
ACACGGTGCAAAAATATTGCAAAAGCGTTTTGATTTTTTACATTTACTGCAAGAATGGGCAGCCCCAATTCATCGTGGTA
TAAGCCGTGGATTAGAAGAATTAGAAATTATTTATAAACCAAGTGTAGATGTATCAGAATCAATGGATTTGTCGAAAATA
AAAGAAGTATACTATGAAAGTTTTCAATCTGTGAAACAACGTGAAATTTTCCGTGGTACGACTTTAATTGGTCCTCATCG
TGATGATTTACAATTCTTCGTTAATAGTAAAAATGTTCAAGTCTTTGGTTCGCAAGGACAACAACGAACGACTGCACTAT
CCCTAAAATTAGCTGAAATTGAATTGATTTATTCAGAGGTTAAAGAATATCCAATCCTTTTACTGGATGATGTTTTATCA
GAATTAGACGATTATCGTCAATCACATCTGTTAAATACAATTCAAGGAAAGGTGCAAACATTTGTTACAACGACGAGTGT
CGACGGAATTGAACACGAAACATTGAAAGATGCGAAAACAATTCATGTAACGAACGGCACGGTAGATTGTGAAATAGATA
GGGCATAA

Domains

Predicted by InterproScan.

• RecF/RecN/SMC N terminal domain (SMC_N) (2-348)

3D structure

• AlphaFold DB: A0A2B5ZTQ8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recF	Bacillus subtilis subsp. subtilis str. 168	66.576	98.133	0.653