Detailed information
Bioinformatically predicted
Overview
| Name | comGA | Type | Machinery gene |
| Locus tag | EXW33_RS06235 | Genome accession | NZ_CP036014 |
| Coordinates | 1238109..1239152 (-) | Length | 347 a.a. |
| NCBI ID | WP_001013172.1 | Uniprot ID | - |
| Organism | Bacillus toyonensis strain BPN45/4 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1233109..1244152
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EXW33_RS06190 (EXW33_06375) | - | 1233534..1233734 (-) | 201 | WP_000106086.1 | YqzE family protein | - |
| EXW33_RS06195 (EXW33_06380) | - | 1233773..1234270 (-) | 498 | WP_000836652.1 | shikimate kinase | - |
| EXW33_RS06200 (EXW33_06385) | - | 1234391..1235041 (-) | 651 | WP_000183872.1 | 2OG-Fe(II) oxygenase | - |
| EXW33_RS06205 (EXW33_06390) | comGG | 1235216..1235587 (-) | 372 | WP_000743702.1 | competence type IV pilus minor pilin ComGG | - |
| EXW33_RS06210 (EXW33_06395) | comGF | 1235584..1236057 (-) | 474 | WP_000477946.1 | competence type IV pilus minor pilin ComGF | - |
| EXW33_RS06215 (EXW33_06400) | - | 1236027..1236329 (-) | 303 | WP_000829524.1 | hypothetical protein | - |
| EXW33_RS06220 (EXW33_06405) | comGD | 1236322..1236777 (-) | 456 | WP_000810404.1 | competence type IV pilus minor pilin ComGD | - |
| EXW33_RS06225 (EXW33_06410) | comGC | 1236774..1237073 (-) | 300 | WP_001178691.1 | competence type IV pilus major pilin ComGC | - |
| EXW33_RS06230 (EXW33_06415) | comGB | 1237085..1238122 (-) | 1038 | WP_002093281.1 | competence type IV pilus assembly protein ComGB | - |
| EXW33_RS06235 (EXW33_06420) | comGA | 1238109..1239152 (-) | 1044 | WP_001013172.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| EXW33_RS06240 (EXW33_06425) | - | 1239357..1240052 (+) | 696 | WP_000434112.1 | helix-turn-helix domain-containing protein | - |
| EXW33_RS06245 (EXW33_06430) | - | 1240178..1240420 (+) | 243 | WP_000440717.1 | DUF2626 domain-containing protein | - |
| EXW33_RS06250 (EXW33_06435) | - | 1240528..1241922 (+) | 1395 | WP_001094350.1 | L-cystine transporter | - |
| EXW33_RS06255 (EXW33_06440) | - | 1241985..1242377 (-) | 393 | WP_000875407.1 | hypothetical protein | - |
| EXW33_RS06260 (EXW33_06445) | - | 1242465..1242680 (-) | 216 | WP_001008324.1 | DUF3912 family protein | - |
| EXW33_RS06265 (EXW33_06450) | - | 1242933..1243244 (+) | 312 | WP_001092833.1 | hypothetical protein | - |
| EXW33_RS06270 (EXW33_06455) | - | 1243280..1243768 (-) | 489 | WP_000764243.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 347 a.a. Molecular weight: 39204.57 Da Isoelectric Point: 8.5491
>NTDB_id=345864 EXW33_RS06235 WP_001013172.1 1238109..1239152(-) (comGA) [Bacillus toyonensis strain BPN45/4]
MNGIEIFANTILKEACRVQASDLHIVPRQKDVAVQLRIGKDLITKQCIEKEFGEKLVSHFKFLASMDIGERRKPQNGSLY
LQIDGQEVYLRLSTLPTVYRESLVIRLHLQASVQPLSHLSLFPSTAEKLLSFLRYSHGLLVFTGPTGSGKTTTMYALLEV
IRKRKTRRIVTLEDPVEKRKDDLLQIQINEKAGITYEAGLKAILRHDPDIILVGEIRDEETAKIAVRASLTGHLVMTTLH
TNDAKGAILRFMDYGITRQEIEQALLAVAAQRLVELKCPFCRGKCSILCKSMRQVRQASVYELLDGYDLQQAIKEANGEC
VTYKHETLESSIRKGYALGFLEEDVYV
MNGIEIFANTILKEACRVQASDLHIVPRQKDVAVQLRIGKDLITKQCIEKEFGEKLVSHFKFLASMDIGERRKPQNGSLY
LQIDGQEVYLRLSTLPTVYRESLVIRLHLQASVQPLSHLSLFPSTAEKLLSFLRYSHGLLVFTGPTGSGKTTTMYALLEV
IRKRKTRRIVTLEDPVEKRKDDLLQIQINEKAGITYEAGLKAILRHDPDIILVGEIRDEETAKIAVRASLTGHLVMTTLH
TNDAKGAILRFMDYGITRQEIEQALLAVAAQRLVELKCPFCRGKCSILCKSMRQVRQASVYELLDGYDLQQAIKEANGEC
VTYKHETLESSIRKGYALGFLEEDVYV
Nucleotide
Download Length: 1044 bp
>NTDB_id=345864 EXW33_RS06235 WP_001013172.1 1238109..1239152(-) (comGA) [Bacillus toyonensis strain BPN45/4]
ATGAATGGAATTGAAATTTTTGCGAATACAATTTTGAAAGAAGCGTGTAGGGTACAAGCATCGGACTTACATATTGTGCC
CCGGCAGAAGGATGTAGCGGTTCAGCTACGTATAGGAAAAGATTTAATTACGAAACAATGTATTGAAAAGGAGTTTGGAG
AAAAACTTGTTTCGCACTTTAAATTTTTGGCATCCATGGATATAGGAGAGAGGCGGAAGCCACAAAATGGTTCATTGTAT
TTACAAATTGATGGACAAGAAGTGTATTTACGTCTTTCAACACTTCCGACTGTATATCGAGAAAGTCTCGTGATTCGCCT
TCATTTACAAGCATCTGTGCAGCCATTATCTCATCTTTCGTTATTTCCAAGTACGGCGGAAAAACTCCTCTCTTTTTTAC
GTTATTCACATGGTCTACTCGTATTTACTGGACCGACTGGTTCTGGGAAGACAACGACAATGTATGCATTATTAGAGGTA
ATTAGAAAAAGGAAAACACGTCGAATTGTAACACTTGAAGACCCAGTTGAAAAAAGAAAAGACGATTTATTACAAATTCA
AATAAATGAAAAAGCAGGTATCACATATGAGGCTGGACTAAAGGCTATTTTACGCCATGATCCAGATATTATATTAGTTG
GTGAAATCCGGGATGAAGAAACAGCAAAAATAGCTGTAAGAGCAAGTTTAACTGGACATTTAGTAATGACGACCCTGCAT
ACGAATGATGCGAAAGGAGCGATACTCAGATTTATGGATTATGGCATAACGAGGCAAGAAATTGAACAAGCTTTATTGGC
TGTAGCTGCACAGCGACTTGTTGAATTAAAGTGTCCATTTTGCAGAGGAAAGTGCTCAATTTTATGTAAATCAATGCGGC
AAGTAAGACAAGCAAGCGTTTACGAGTTGTTAGATGGATATGATTTGCAACAAGCAATTAAAGAAGCGAACGGAGAATGT
GTTACGTACAAACATGAAACATTAGAATCTTCGATACGAAAAGGGTATGCTTTAGGATTTTTAGAAGAAGATGTTTATGT
TTAA
ATGAATGGAATTGAAATTTTTGCGAATACAATTTTGAAAGAAGCGTGTAGGGTACAAGCATCGGACTTACATATTGTGCC
CCGGCAGAAGGATGTAGCGGTTCAGCTACGTATAGGAAAAGATTTAATTACGAAACAATGTATTGAAAAGGAGTTTGGAG
AAAAACTTGTTTCGCACTTTAAATTTTTGGCATCCATGGATATAGGAGAGAGGCGGAAGCCACAAAATGGTTCATTGTAT
TTACAAATTGATGGACAAGAAGTGTATTTACGTCTTTCAACACTTCCGACTGTATATCGAGAAAGTCTCGTGATTCGCCT
TCATTTACAAGCATCTGTGCAGCCATTATCTCATCTTTCGTTATTTCCAAGTACGGCGGAAAAACTCCTCTCTTTTTTAC
GTTATTCACATGGTCTACTCGTATTTACTGGACCGACTGGTTCTGGGAAGACAACGACAATGTATGCATTATTAGAGGTA
ATTAGAAAAAGGAAAACACGTCGAATTGTAACACTTGAAGACCCAGTTGAAAAAAGAAAAGACGATTTATTACAAATTCA
AATAAATGAAAAAGCAGGTATCACATATGAGGCTGGACTAAAGGCTATTTTACGCCATGATCCAGATATTATATTAGTTG
GTGAAATCCGGGATGAAGAAACAGCAAAAATAGCTGTAAGAGCAAGTTTAACTGGACATTTAGTAATGACGACCCTGCAT
ACGAATGATGCGAAAGGAGCGATACTCAGATTTATGGATTATGGCATAACGAGGCAAGAAATTGAACAAGCTTTATTGGC
TGTAGCTGCACAGCGACTTGTTGAATTAAAGTGTCCATTTTGCAGAGGAAAGTGCTCAATTTTATGTAAATCAATGCGGC
AAGTAAGACAAGCAAGCGTTTACGAGTTGTTAGATGGATATGATTTGCAACAAGCAATTAAAGAAGCGAACGGAGAATGT
GTTACGTACAAACATGAAACATTAGAATCTTCGATACGAAAAGGGTATGCTTTAGGATTTTTAGAAGAAGATGTTTATGT
TTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGA | Bacillus subtilis subsp. subtilis str. 168 |
57.637 |
100 |
0.576 |