Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   EXW33_RS04980 Genome accession   NZ_CP036014
Coordinates   1020003..1020461 (+) Length   152 a.a.
NCBI ID   WP_000804859.1    Uniprot ID   A0A1V6LJT3
Organism   Bacillus toyonensis strain BPN45/4     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1015003..1025461
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EXW33_RS04965 (EXW33_05115) - 1015666..1015902 (+) 237 WP_000283739.1 hypothetical protein -
  EXW33_RS04970 (EXW33_05120) - 1016071..1018179 (-) 2109 WP_000421687.1 polyphosphate kinase -
  EXW33_RS04975 (EXW33_05125) - 1018297..1019826 (-) 1530 WP_000661381.1 Ppx/GppA family phosphatase -
  EXW33_RS04980 (EXW33_05130) kre 1020003..1020461 (+) 459 WP_000804859.1 YkyB family protein Regulator
  EXW33_RS04985 (EXW33_05135) - 1020493..1021155 (-) 663 WP_000922477.1 YkyA family protein -
  EXW33_RS04990 (EXW33_05140) - 1021801..1022454 (-) 654 WP_000680808.1 diguanylate cyclase -
  EXW33_RS04995 (EXW33_05145) - 1022619..1022852 (+) 234 WP_000939445.1 SPP1 phage holin family protein -
  EXW33_RS05000 (EXW33_05150) - 1022884..1023384 (-) 501 WP_000708172.1 hypothetical protein -
  EXW33_RS05005 (EXW33_05155) - 1023819..1025360 (+) 1542 WP_000449890.1 MDR family MFS transporter -

Sequence

Protein


Download         Length: 152 a.a.        Molecular weight: 17800.47 Da        Isoelectric Point: 10.6181

>NTDB_id=345860 EXW33_RS04980 WP_000804859.1 1020003..1020461(+) (kre) [Bacillus toyonensis strain BPN45/4]
MKPSQPQSQLQNQHPINRLAQSIFVVNRHAKAATNPKYLYWLKKTALERLIAEKKAIKEGLHFSRNPRFSQQQSDVLIRL
GDYYFHIPPTKEDFRNLPHLGHLESSYRNPKTTLSLTVSKKTLQDYIGPEALKQEKKLSEPVPWYSRTYTKK

Nucleotide


Download         Length: 459 bp        

>NTDB_id=345860 EXW33_RS04980 WP_000804859.1 1020003..1020461(+) (kre) [Bacillus toyonensis strain BPN45/4]
ATGAAACCTTCACAACCACAATCTCAATTACAAAACCAACATCCTATTAATCGACTAGCTCAATCTATTTTCGTTGTGAA
TCGTCATGCCAAAGCTGCAACTAACCCTAAATATTTATACTGGTTAAAAAAGACAGCTTTAGAGCGTTTAATCGCCGAAA
AAAAAGCAATTAAAGAAGGATTACATTTCTCTAGAAATCCACGTTTTAGCCAACAACAATCTGATGTTCTTATACGGTTA
GGCGATTATTATTTCCACATCCCTCCTACGAAAGAAGATTTTCGAAACCTACCACATCTTGGTCATCTTGAATCCTCCTA
CCGAAACCCGAAAACAACCTTGTCTTTAACAGTTTCCAAAAAAACACTTCAAGATTATATTGGTCCTGAAGCACTGAAAC
AAGAAAAAAAATTAAGTGAACCTGTTCCATGGTATAGCCGCACTTATACAAAAAAATAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(16-128)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A1V6LJT3

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

65.487

74.342

0.487

Multiple sequence alignment