Detailed information
Bioinformatically predicted
Overview
| Name | abrB | Type | Regulator |
| Locus tag | EXW40_RS09845 | Genome accession | NZ_CP036009 |
| Coordinates | 1923942..1924229 (+) | Length | 95 a.a. |
| NCBI ID | WP_002012401.1 | Uniprot ID | A0A366G1Y4 |
| Organism | Bacillus mycoides strain BPN43/2 | ||
| Function | repression of comK; repression of rok (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1918942..1929229
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EXW40_RS09825 (EXW40_09950) | - | 1920125..1920325 (+) | 201 | WP_215587660.1 | DUF4083 domain-containing protein | - |
| EXW40_RS09830 (EXW40_09955) | - | 1920353..1920814 (+) | 462 | WP_002141378.1 | NUDIX hydrolase | - |
| EXW40_RS09835 (EXW40_09960) | nadE | 1920859..1921677 (-) | 819 | WP_002031433.1 | ammonia-dependent NAD(+) synthetase | - |
| EXW40_RS09840 (EXW40_09965) | - | 1921942..1923822 (+) | 1881 | WP_215587661.1 | ABC transporter permease | - |
| EXW40_RS09845 (EXW40_09970) | abrB | 1923942..1924229 (+) | 288 | WP_002012401.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Regulator |
| EXW40_RS09850 (EXW40_09975) | - | 1924520..1925470 (+) | 951 | WP_002012402.1 | serine protease | - |
| EXW40_RS09855 (EXW40_09980) | - | 1925511..1925819 (-) | 309 | WP_016102179.1 | helix-turn-helix transcriptional regulator | - |
| EXW40_RS09860 (EXW40_09985) | - | 1925927..1926862 (+) | 936 | WP_215587662.1 | aldo/keto reductase | - |
| EXW40_RS09865 (EXW40_09990) | - | 1926912..1928087 (+) | 1176 | WP_215587663.1 | MFS transporter | - |
| EXW40_RS09870 (EXW40_09995) | - | 1928297..1928521 (-) | 225 | WP_000162608.1 | hypothetical protein | - |
| EXW40_RS09875 (EXW40_10000) | - | 1928606..1928953 (-) | 348 | WP_000426320.1 | DUF4257 domain-containing protein | - |
Sequence
Protein
Download Length: 95 a.a. Molecular weight: 10647.42 Da Isoelectric Point: 6.9795
>NTDB_id=345824 EXW40_RS09845 WP_002012401.1 1923942..1924229(+) (abrB) [Bacillus mycoides strain BPN43/2]
MKATGIIRKVDELGRIVIPKELRDVLGIQIKSPLEIFVEEDKVILQKYQPYNACQITGDVSDQNISLANGNITVSIEGAK
HVIKEIEQFLNKSKI
MKATGIIRKVDELGRIVIPKELRDVLGIQIKSPLEIFVEEDKVILQKYQPYNACQITGDVSDQNISLANGNITVSIEGAK
HVIKEIEQFLNKSKI
Nucleotide
Download Length: 288 bp
>NTDB_id=345824 EXW40_RS09845 WP_002012401.1 1923942..1924229(+) (abrB) [Bacillus mycoides strain BPN43/2]
ATGAAAGCAACAGGAATTATTCGAAAAGTAGATGAATTGGGACGGATAGTTATTCCTAAAGAATTACGAGATGTATTAGG
AATACAAATCAAATCACCACTTGAAATTTTTGTAGAAGAAGACAAAGTCATTTTACAAAAATATCAACCTTACAATGCTT
GTCAAATAACAGGTGATGTTTCAGACCAAAATATTTCATTAGCAAATGGAAACATTACTGTTAGTATAGAAGGCGCAAAA
CATGTAATAAAAGAAATTGAGCAGTTTTTGAACAAGAGTAAGATTTAG
ATGAAAGCAACAGGAATTATTCGAAAAGTAGATGAATTGGGACGGATAGTTATTCCTAAAGAATTACGAGATGTATTAGG
AATACAAATCAAATCACCACTTGAAATTTTTGTAGAAGAAGACAAAGTCATTTTACAAAAATATCAACCTTACAATGCTT
GTCAAATAACAGGTGATGTTTCAGACCAAAATATTTCATTAGCAAATGGAAACATTACTGTTAGTATAGAAGGCGCAAAA
CATGTAATAAAAGAAATTGAGCAGTTTTTGAACAAGAGTAAGATTTAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| abrB | Bacillus subtilis subsp. subtilis str. 168 |
56.383 |
98.947 |
0.558 |