Detailed information
Bioinformatically predicted
Overview
| Name | sinR | Type | Regulator |
| Locus tag | EXW40_RS06505 | Genome accession | NZ_CP036009 |
| Coordinates | 1275639..1275962 (-) | Length | 107 a.a. |
| NCBI ID | WP_002064339.1 | Uniprot ID | J8AHG1 |
| Organism | Bacillus mycoides strain BPN43/2 | ||
| Function | repression of rok; repression of degU; repression of spo0A (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1270639..1280962
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EXW40_RS06480 (EXW40_06590) | - | 1270828..1272114 (+) | 1287 | WP_215587481.1 | D-alanyl-D-alanine carboxypeptidase family protein | - |
| EXW40_RS06485 (EXW40_06595) | sipW | 1272311..1272880 (+) | 570 | WP_002064334.1 | signal peptidase I SipW | - |
| EXW40_RS06490 (EXW40_06600) | - | 1272947..1273534 (+) | 588 | WP_002030432.1 | CalY family protein | - |
| EXW40_RS06495 (EXW40_06605) | - | 1273696..1274523 (+) | 828 | WP_215587482.1 | DUF4047 domain-containing protein | - |
| EXW40_RS06500 (EXW40_06610) | calY | 1274962..1275555 (+) | 594 | WP_061675896.1 | biofilm matrix protein CalY | - |
| EXW40_RS06505 (EXW40_06615) | sinR | 1275639..1275962 (-) | 324 | WP_002064339.1 | helix-turn-helix domain-containing protein | Regulator |
| EXW40_RS06510 (EXW40_06620) | - | 1276042..1276176 (-) | 135 | WP_002011474.1 | anti-repressor SinI family protein | - |
| EXW40_RS06515 (EXW40_06625) | inhA1 | 1276519..1278906 (+) | 2388 | WP_215587483.1 | M6 family metalloprotease immune inhibitor InhA1 | - |
| EXW40_RS06520 (EXW40_06630) | - | 1279065..1280432 (+) | 1368 | WP_215587484.1 | aldehyde dehydrogenase | - |
Sequence
Protein
Download Length: 107 a.a. Molecular weight: 12320.06 Da Isoelectric Point: 7.2050
>NTDB_id=345821 EXW40_RS06505 WP_002064339.1 1275639..1275962(-) (sinR) [Bacillus mycoides strain BPN43/2]
MIGERIKRLRLQKGISLTELAEKAGVAKSYISSIERNLQKNPSIQFLEKISAVLQIPVDTLLHDETTTESHLDSEWTQLV
KDAMSSGVSKEQFREFLEFTQWKKNQQ
MIGERIKRLRLQKGISLTELAEKAGVAKSYISSIERNLQKNPSIQFLEKISAVLQIPVDTLLHDETTTESHLDSEWTQLV
KDAMSSGVSKEQFREFLEFTQWKKNQQ
Nucleotide
Download Length: 324 bp
>NTDB_id=345821 EXW40_RS06505 WP_002064339.1 1275639..1275962(-) (sinR) [Bacillus mycoides strain BPN43/2]
ATGATAGGAGAACGTATAAAACGCCTTCGTTTACAAAAGGGCATTTCACTAACAGAACTCGCCGAAAAAGCTGGTGTAGC
TAAATCTTACATTAGTTCTATAGAACGAAATTTACAAAAAAACCCTTCCATTCAGTTTCTCGAAAAAATTTCAGCTGTTC
TACAAATTCCAGTTGATACGTTACTTCACGATGAAACAACAACAGAAAGTCATCTAGACTCCGAATGGACACAACTCGTT
AAAGATGCGATGAGCTCCGGTGTCTCAAAAGAACAGTTTCGTGAATTTCTTGAATTTACACAATGGAAGAAAAATCAACA
ATAA
ATGATAGGAGAACGTATAAAACGCCTTCGTTTACAAAAGGGCATTTCACTAACAGAACTCGCCGAAAAAGCTGGTGTAGC
TAAATCTTACATTAGTTCTATAGAACGAAATTTACAAAAAAACCCTTCCATTCAGTTTCTCGAAAAAATTTCAGCTGTTC
TACAAATTCCAGTTGATACGTTACTTCACGATGAAACAACAACAGAAAGTCATCTAGACTCCGAATGGACACAACTCGTT
AAAGATGCGATGAGCTCCGGTGTCTCAAAAGAACAGTTTCGTGAATTTCTTGAATTTACACAATGGAAGAAAAATCAACA
ATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| sinR | Bacillus subtilis subsp. subtilis str. 168 |
67.89 |
100 |
0.692 |