Detailed information    

insolico Bioinformatically predicted

Overview


Name   mecA   Type   Regulator
Locus tag   EXW40_RS06095 Genome accession   NZ_CP036009
Coordinates   1198862..1199545 (+) Length   227 a.a.
NCBI ID   WP_002149820.1    Uniprot ID   A0A366GD70
Organism   Bacillus mycoides strain BPN43/2     
Function   degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context


Location: 1193862..1204545
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EXW40_RS06075 (EXW40_06175) - 1194846..1196492 (+) 1647 WP_060749446.1 peptide ABC transporter substrate-binding protein -
  EXW40_RS06080 (EXW40_06180) - 1196522..1196725 (-) 204 WP_000559981.1 hypothetical protein -
  EXW40_RS06085 (EXW40_06190) spx 1197305..1197700 (+) 396 WP_002011348.1 transcriptional regulator Spx -
  EXW40_RS06090 (EXW40_06195) - 1197751..1198425 (-) 675 WP_002011349.1 TerC family protein -
  EXW40_RS06095 (EXW40_06200) mecA 1198862..1199545 (+) 684 WP_002149820.1 adaptor protein MecA Regulator
  EXW40_RS06100 (EXW40_06205) - 1199617..1201161 (+) 1545 WP_113937681.1 cardiolipin synthase -
  EXW40_RS06105 (EXW40_06210) - 1201252..1202487 (+) 1236 WP_215587455.1 competence protein CoiA family protein -
  EXW40_RS06110 (EXW40_06215) pepF 1202538..1204364 (+) 1827 WP_215587456.1 oligoendopeptidase F Regulator

Sequence


Protein


Download         Length: 227 a.a.        Molecular weight: 26999.08 Da        Isoelectric Point: 4.0116

>NTDB_id=345819 EXW40_RS06095 WP_002149820.1 1198862..1199545(+) (mecA) [Bacillus mycoides strain BPN43/2]
MDIERINDHTMKFFITYIDIEDRGFNREEIWYDRERSEELFWEMMDEARDHDDFFIDGPLWIQVQAVDKGIEVLVTKAEL
SKDGQKLELPIGVDKIIDIPLDEGIESLFQQELVEEVEEQVGTNFNEDGTFGFLIKFNDFEDVISLSHRLIFEDIKDELH
SFEDRYYVYVEFDEVLHDEEEIDRILSIVLEYGEESTLTIHRVSEYGKQVVKERALETIRNNFPPKT

Nucleotide


Download         Length: 684 bp        

>NTDB_id=345819 EXW40_RS06095 WP_002149820.1 1198862..1199545(+) (mecA) [Bacillus mycoides strain BPN43/2]
TTGGATATTGAAAGAATTAATGACCATACGATGAAATTTTTTATTACGTACATTGATATAGAGGACAGAGGGTTTAATCG
TGAAGAAATTTGGTATGATCGCGAACGAAGTGAAGAGCTCTTTTGGGAGATGATGGACGAAGCTCGTGATCATGATGATT
TCTTTATCGATGGGCCGTTATGGATCCAAGTGCAAGCAGTCGATAAAGGGATTGAAGTACTTGTAACGAAAGCGGAGCTT
TCAAAGGATGGACAAAAGCTGGAATTACCAATAGGTGTAGACAAAATTATAGACATTCCTCTAGATGAAGGCATCGAATC
ATTATTCCAGCAAGAATTAGTGGAAGAGGTAGAAGAACAAGTAGGAACAAACTTTAATGAAGATGGTACGTTTGGCTTTT
TAATTAAGTTTAATGATTTTGAAGATGTTATTTCATTAAGTCATCGTCTTATCTTTGAAGATATAAAAGATGAATTACAT
TCATTTGAGGACCGCTATTATGTATATGTGGAATTCGATGAAGTGCTACATGATGAAGAAGAGATTGATCGTATTTTAAG
TATTGTTTTAGAATATGGAGAAGAATCTACTTTAACGATTCACCGTGTAAGTGAGTATGGGAAACAGGTTGTGAAAGAGC
GTGCGCTTGAGACAATTCGCAACAATTTCCCTCCTAAAACGTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A366GD70

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mecA Bacillus subtilis subsp. subtilis str. 168

54.386

100

0.546


Multiple sequence alignment