Detailed information
Bioinformatically predicted
Overview
| Name | abrB | Type | Regulator |
| Locus tag | EXW40_RS00220 | Genome accession | NZ_CP036009 |
| Coordinates | 40492..40776 (-) | Length | 94 a.a. |
| NCBI ID | WP_000843037.1 | Uniprot ID | A0A366FUU6 |
| Organism | Bacillus mycoides strain BPN43/2 | ||
| Function | repression of comK; repression of rok (predicted from homology) Competence regulation |
||
Genomic Context
Location: 35492..45776
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EXW40_RS00185 (EXW40_00185) | tmk | 35646..36272 (+) | 627 | WP_002009634.1 | dTMP kinase | - |
| EXW40_RS00190 (EXW40_00190) | holB | 36308..37291 (+) | 984 | WP_002009636.1 | DNA polymerase III subunit delta' | - |
| EXW40_RS00195 (EXW40_00195) | - | 37297..38124 (+) | 828 | WP_002009637.1 | stage 0 sporulation family protein | - |
| EXW40_RS00200 (EXW40_00200) | yabA | 38139..38489 (+) | 351 | WP_002009639.1 | DNA replication initiation control protein YabA | - |
| EXW40_RS00205 (EXW40_00205) | - | 38610..39350 (+) | 741 | WP_002130206.1 | tRNA1(Val) (adenine(37)-N6)-methyltransferase | - |
| EXW40_RS00210 (EXW40_00210) | - | 39337..39627 (+) | 291 | WP_002130207.1 | GIY-YIG nuclease family protein | - |
| EXW40_RS00215 (EXW40_00215) | rsmI | 39596..40471 (+) | 876 | WP_002130208.1 | 16S rRNA (cytidine(1402)-2'-O)-methyltransferase | - |
| EXW40_RS00220 (EXW40_00220) | abrB | 40492..40776 (-) | 285 | WP_000843037.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Regulator |
| EXW40_RS00225 (EXW40_00225) | metG | 41271..43280 (+) | 2010 | WP_078173487.1 | methionine--tRNA ligase | - |
| EXW40_RS00230 (EXW40_00230) | - | 43446..44213 (+) | 768 | WP_002009645.1 | TatD family hydrolase | - |
| EXW40_RS00235 (EXW40_00235) | rnmV | 44474..45031 (+) | 558 | WP_002029323.1 | ribonuclease M5 | - |
Sequence
Protein
Download Length: 94 a.a. Molecular weight: 10476.14 Da Isoelectric Point: 4.7174
>NTDB_id=345805 EXW40_RS00220 WP_000843037.1 40492..40776(-) (abrB) [Bacillus mycoides strain BPN43/2]
MKSTGIVRKVDELGRVVIPIELRRTLGIAEKDALEIYVDDEKIILKKYKPNMTCQVTGEVSDGNLSLAEGKIILSKEGAE
QVLNELQDYIETAK
MKSTGIVRKVDELGRVVIPIELRRTLGIAEKDALEIYVDDEKIILKKYKPNMTCQVTGEVSDGNLSLAEGKIILSKEGAE
QVLNELQDYIETAK
Nucleotide
Download Length: 285 bp
>NTDB_id=345805 EXW40_RS00220 WP_000843037.1 40492..40776(-) (abrB) [Bacillus mycoides strain BPN43/2]
ATGAAATCTACTGGTATCGTTCGTAAAGTTGATGAATTAGGTCGTGTAGTAATTCCAATCGAATTACGCCGTACTTTAGG
TATTGCAGAAAAGGATGCTCTTGAAATCTACGTTGATGATGAAAAAATCATCTTAAAGAAATATAAACCAAACATGACTT
GCCAAGTAACTGGTGAAGTATCTGATGGTAACCTATCTTTAGCTGAAGGTAAAATTATCTTAAGTAAAGAAGGCGCTGAA
CAAGTCTTAAACGAACTTCAAGATTATATCGAAACAGCAAAATAA
ATGAAATCTACTGGTATCGTTCGTAAAGTTGATGAATTAGGTCGTGTAGTAATTCCAATCGAATTACGCCGTACTTTAGG
TATTGCAGAAAAGGATGCTCTTGAAATCTACGTTGATGATGAAAAAATCATCTTAAAGAAATATAAACCAAACATGACTT
GCCAAGTAACTGGTGAAGTATCTGATGGTAACCTATCTTTAGCTGAAGGTAAAATTATCTTAAGTAAAGAAGGCGCTGAA
CAAGTCTTAAACGAACTTCAAGATTATATCGAAACAGCAAAATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| abrB | Bacillus subtilis subsp. subtilis str. 168 |
84.043 |
100 |
0.84 |