Detailed information NTG0345796

Bioinformatically predicted

Overview

• Name: recF
• Type: Machinery gene
• Locus tag: EXW61_RS26660
• Genome accession: NZ_CP036004
• Coordinates: 5158850..5159977 (-)
• Length: 375 a.a.
• NCBI ID: WP_002016486.1
• Uniprot ID: -
• Organism: Bacillus mycoides strain BPN37/2
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 5153850..5164977

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EXW61_RS26650 (EXW61_27145)	gyrA	5154329..5156800 (-)	2472	WP_002034984.1	DNA gyrase subunit A	-
EXW61_RS26655 (EXW61_27150)	gyrB	5156889..5158811 (-)	1923	WP_002034986.1	DNA topoisomerase (ATP-hydrolyzing) subunit B	-
EXW61_RS26660 (EXW61_27155)	recF	5158850..5159977 (-)	1128	WP_002016486.1	DNA replication/repair protein RecF	Machinery gene
EXW61_RS26665 (EXW61_27160)	yaaA	5159990..5160202 (-)	213	WP_002016484.1	S4 domain-containing protein YaaA	-
EXW61_RS26670 (EXW61_27165)	dnaN	5160331..5161476 (-)	1146	WP_002034988.1	DNA polymerase III subunit beta	-
EXW61_RS26675 (EXW61_27170)	dnaA	5161659..5162999 (-)	1341	WP_002016481.1	chromosomal replication initiator protein DnaA	-
EXW61_RS26680 (EXW61_27175)	rpmH	5163563..5163697 (+)	135	WP_000831901.1	50S ribosomal protein L34	-
EXW61_RS26685 (EXW61_27180)	rnpA	5163774..5164121 (+)	348	WP_002089963.1	ribonuclease P protein component	-
EXW61_RS26690 (EXW61_27185)	spoIIIJ	5164174..5164941 (+)	768	WP_002016477.1	YidC family membrane integrase SpoIIIJ	-

Sequence

Protein

• Length: 375 a.a.
• Molecular weight: 43500.76 Da
• Isoelectric Point: 6.8418

>NTDB_id=345796 EXW61_RS26660 WP_002016486.1 5158850..5159977(-) (recF) [Bacillus mycoides strain BPN37/2]
MFITEIQLKNYRNYEHLELSFEDKVNVIIGENAQGKTNLMEAIYVLAMAKSHRTSNDRELIRWDEDYGNIKGRLQRRNSS
VSLELNISKKGKKAKLNQLEQQKLSQYIGEMNVVMFAPEDLNLVKGSPQVRRRFLDMELGQIAPVYLYELSQYQKVLTQR
NHLLKKMQGNSKNEETMLDVFTLQLIEHGAKILRKRFEFLHLLQEWAAPIHRGISRGLEELEIVYKPSVDVSESMDLSKI
KEVYYESFQSVKQREIFRGTTLLGPHRDDLQFFVNSKNVQVFGSQGQQRTTALSLKLAEIELIYSEVKEYPILLLDDVLS
ELDDYRQSHLLNTIQGKVQTFVTTTSVEGIEHETLKEAKTIHVTNGTVDCEIDRK

Nucleotide

• Length: 1128 bp

>NTDB_id=345796 EXW61_RS26660 WP_002016486.1 5158850..5159977(-) (recF) [Bacillus mycoides strain BPN37/2]
TTGTTTATTACAGAAATACAATTAAAAAACTATCGCAATTATGAGCATTTAGAGCTTTCCTTTGAGGATAAAGTCAATGT
AATTATTGGTGAAAATGCGCAAGGGAAAACGAATCTGATGGAAGCTATTTATGTATTGGCGATGGCGAAATCTCATAGAA
CTTCGAACGATCGTGAACTCATTCGTTGGGATGAGGATTATGGTAATATAAAAGGTAGATTACAAAGGCGAAATAGTTCA
GTATCCTTAGAATTAAATATTTCAAAAAAAGGTAAGAAGGCAAAGTTAAATCAGTTAGAACAACAAAAATTGAGCCAGTA
TATTGGTGAAATGAATGTTGTTATGTTTGCCCCAGAAGATTTAAATCTTGTAAAAGGAAGCCCTCAAGTACGAAGACGCT
TTTTGGATATGGAACTTGGACAAATAGCTCCGGTCTATTTGTATGAATTAAGTCAATATCAAAAGGTACTCACGCAACGA
AATCATTTACTTAAGAAGATGCAAGGGAATAGTAAAAATGAGGAAACGATGTTGGATGTATTTACACTTCAACTTATTGA
GCATGGTGCAAAAATTTTGCGAAAACGTTTTGAGTTTTTGCATTTACTACAAGAATGGGCTGCTCCAATTCATCGCGGAA
TTAGCAGGGGATTAGAGGAGTTAGAAATCGTTTATAAACCAAGTGTAGATGTATCAGAATCAATGGATTTGTCGAAAATA
AAGGAAGTATACTATGAAAGTTTTCAATCTGTGAAACAACGTGAAATTTTTCGGGGTACAACTTTACTTGGTCCTCATCG
TGATGATTTACAATTCTTCGTTAATAGTAAAAATGTTCAAGTCTTTGGTTCACAAGGACAACAACGAACAACCGCACTAT
CCCTAAAATTGGCTGAAATTGAATTGATATACTCAGAGGTTAAGGAATATCCAATTCTTTTACTAGATGATGTGTTATCA
GAATTAGATGATTATCGTCAATCGCATCTGCTAAATACAATTCAAGGAAAAGTACAAACCTTTGTAACAACGACGAGTGT
CGAGGGAATTGAACACGAAACATTGAAAGAAGCGAAAACAATTCATGTAACGAACGGCACGGTAGATTGTGAAATAGACA
GAAAATAA

Domains

Predicted by InterproScan.

• RecF/RecN/SMC N terminal domain (SMC_N) (2-351)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recF	Bacillus subtilis subsp. subtilis str. 168	66.848	98.133	0.656