Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0A   Type   Regulator
Locus tag   EXW61_RS05120 Genome accession   NZ_CP036004
Coordinates   937825..938619 (+) Length   264 a.a.
NCBI ID   WP_002015081.1    Uniprot ID   R8I3Q7
Organism   Bacillus mycoides strain BPN37/2     
Function   activation and repression of comK; repression of rok; repression of abrB (predicted from homology)   
Competence regulation

Genomic Context

Location: 932825..943619
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EXW61_RS05105 (EXW61_05195) argR 933667..934116 (+) 450 WP_002015076.1 arginine repressor ArgR -
  EXW61_RS05110 (EXW61_05200) recN 934387..936126 (+) 1740 WP_215599352.1 DNA repair protein RecN Machinery gene
  EXW61_RS05115 (EXW61_05205) spoIVB 936246..937538 (+) 1293 WP_002015079.1 SpoIVB peptidase -
  EXW61_RS05120 (EXW61_05215) spo0A 937825..938619 (+) 795 WP_002015081.1 sporulation transcription factor Spo0A Regulator
  EXW61_RS05125 (EXW61_05225) - 939225..940520 (+) 1296 WP_215599353.1 WXG100 family type VII secretion target -
  EXW61_RS05130 (EXW61_05230) - 940555..941124 (+) 570 WP_000707095.1 imm11 family protein -
  EXW61_RS05135 (EXW61_05235) - 941155..941607 (+) 453 WP_000265781.1 YrhA family protein -
  EXW61_RS05140 (EXW61_05240) - 941627..942085 (+) 459 WP_000459259.1 SMI1/KNR4 family protein -
  EXW61_RS05145 (EXW61_05245) - 942349..942918 (+) 570 WP_000708204.1 imm11 family protein -
  EXW61_RS05150 - 942954..943103 (+) 150 WP_000339152.1 hypothetical protein -
  EXW61_RS30460 - 943342..943440 (+) 99 Protein_1007 sporulation initiation factor Spo0A C-terminal domain-containing protein -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 29525.32 Da        Isoelectric Point: 7.1180

>NTDB_id=345766 EXW61_RS05120 WP_002015081.1 937825..938619(+) (spo0A) [Bacillus mycoides strain BPN37/2]
MEKIKVCLVDDNKELVSMLESYVAAQDDMEVIGIAYNGQECLNLLKEKQPDILVLDIIMPHLDGLAVLEKMRHIERLRQP
SVIMLTAFGQEDVTKKAVDLGASYFILKPFDMENLTSHIRQVSGKESATIKRPLPSFRSATTIDGKPKNLDASITSIIHE
IGVPAHIKGYMYLREAISMVYNDIELLGSITKVLYPDIAKKYNTTASRVERAIRHAIEVAWSRGNIDSISSLFGYTVSMS
KAKPTNSEFIAMVADKLRLEHKAS

Nucleotide


Download         Length: 795 bp        

>NTDB_id=345766 EXW61_RS05120 WP_002015081.1 937825..938619(+) (spo0A) [Bacillus mycoides strain BPN37/2]
GTGGAAAAAATTAAAGTATGTCTTGTGGATGATAATAAAGAATTGGTATCGATGCTAGAGAGTTATGTTGCTGCCCAAGA
TGATATGGAAGTTATCGGAATTGCTTACAATGGTCAAGAATGTTTAAACTTATTGAAAGAAAAGCAGCCTGATATACTCG
TTTTAGATATTATTATGCCACATTTAGATGGTCTAGCTGTGCTAGAGAAAATGCGACATATTGAAAGATTAAGACAACCT
AGCGTTATTATGTTGACAGCATTCGGACAAGAAGATGTGACGAAAAAAGCGGTTGATTTAGGGGCATCATATTTCATATT
AAAGCCATTTGATATGGAGAATTTAACAAGTCATATTCGTCAAGTTAGTGGTAAGGAAAGTGCTACTATTAAACGTCCAT
TACCATCTTTCCGATCAGCAACAACAATCGATGGAAAACCGAAAAACTTAGATGCGAGTATTACAAGTATCATTCATGAA
ATTGGTGTACCCGCTCATATTAAAGGGTACATGTACTTACGAGAAGCAATCTCTATGGTGTACAATGATATCGAATTACT
AGGATCTATTACGAAAGTATTATATCCAGATATTGCAAAGAAATATAATACAACAGCAAGCCGTGTCGAGCGCGCAATCC
GTCACGCAATTGAAGTAGCTTGGAGCCGTGGGAATATTGATTCTATTTCGTCCTTATTTGGTTATACTGTATCCATGTCA
AAAGCAAAACCTACGAATTCCGAGTTCATCGCAATGGTTGCGGATAAGCTAAGACTTGAACATAAGGCTTCGTAA

Domains

Predicted by InterproScan.

Sporulation initiation factor Spo0A C terminal (Spo0A_C)

(154-257)

Response regulator receiver domain (Response_reg)

(6-119)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB R8I3Q7

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0A Bacillus subtilis subsp. subtilis str. 168

80.899

100

0.818

Multiple sequence alignment