Detailed information    

insolico Bioinformatically predicted

Overview

Name   recO   Type   Machinery gene
Locus tag   EXW61_RS04500 Genome accession   NZ_CP036004
Coordinates   832101..832847 (+) Length   248 a.a.
NCBI ID   WP_002129136.1    Uniprot ID   A0A366GTN2
Organism   Bacillus mycoides strain BPN37/2     
Function   ssDNA annealing; plasmid transformation (predicted from homology)   
DNA processing Homologous recombination

Genomic Context

Location: 827101..837847
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EXW61_RS04470 (EXW61_04560) - 827390..829534 (+) 2145 WP_063218889.1 HD family phosphohydrolase -
  EXW61_RS04475 (EXW61_04565) ybeY 829531..830001 (+) 471 WP_002088675.1 rRNA maturation RNase YbeY -
  EXW61_RS04480 (EXW61_04570) - 829998..830351 (+) 354 WP_002190697.1 diacylglycerol kinase family protein -
  EXW61_RS04485 (EXW61_04575) - 830451..830849 (+) 399 WP_002015184.1 cytidine deaminase -
  EXW61_RS04490 (EXW61_04580) era 830842..831747 (+) 906 WP_002088672.1 GTPase Era -
  EXW61_RS04495 (EXW61_04585) - 831924..832067 (+) 144 WP_000883924.1 YqzL family protein -
  EXW61_RS04500 (EXW61_04590) recO 832101..832847 (+) 747 WP_002129136.1 DNA repair protein RecO Machinery gene
  EXW61_RS04505 (EXW61_04595) - 832954..833586 (+) 633 WP_002015181.1 helix-turn-helix transcriptional regulator -
  EXW61_RS04510 (EXW61_04600) - 833616..834428 (+) 813 WP_002015180.1 pyruvate, water dikinase regulatory protein -
  EXW61_RS04515 - 835093..835236 (+) 144 WP_162836445.1 hypothetical protein -
  EXW61_RS04520 (EXW61_04610) dnaG 835318..837120 (+) 1803 WP_078184440.1 DNA primase -

Sequence

Protein


Download         Length: 248 a.a.        Molecular weight: 28668.23 Da        Isoelectric Point: 8.0540

>NTDB_id=345763 EXW61_RS04500 WP_002129136.1 832101..832847(+) (recO) [Bacillus mycoides strain BPN37/2]
MFQKVEGIVIRTTDYGETNKIVTIYSREFGKVSAMARGAKKPKSRLAAISQLMTHGHFLIQMGSGLGTLQQGEIISSMKE
IREDIFLTAYASFIIELTDKATEDKKHNPYLFEMLYQTLHYMCEGVDPEVLSLIYQTKMLPVLGMRPYFDTCAICHQETD
FVAFSVREGGFLCSRHAEQDPYRIPVGEAVHKLLRLFFHFDLHRLGNVSVKDSTKKQMRTVLNTYYDEYCGIYLKTRRFL
EQLDKFQI

Nucleotide


Download         Length: 747 bp        

>NTDB_id=345763 EXW61_RS04500 WP_002129136.1 832101..832847(+) (recO) [Bacillus mycoides strain BPN37/2]
ATGTTTCAAAAAGTTGAGGGCATTGTTATCCGTACGACAGATTACGGAGAAACAAATAAGATTGTTACAATATACTCACG
GGAATTTGGTAAGGTAAGTGCAATGGCAAGAGGGGCGAAAAAGCCGAAGAGTCGGTTAGCAGCTATTTCGCAACTTATGA
CACATGGTCATTTTCTTATTCAAATGGGATCTGGACTTGGAACTTTGCAACAAGGCGAGATTATTTCATCTATGAAAGAA
ATTCGCGAGGATATATTTTTAACTGCTTATGCATCATTTATTATTGAATTAACCGATAAAGCAACAGAAGATAAGAAGCA
TAATCCGTATTTATTTGAAATGTTATATCAAACGTTGCATTATATGTGTGAGGGTGTTGATCCAGAAGTATTATCATTAA
TTTATCAAACGAAAATGCTTCCGGTATTAGGGATGCGCCCGTACTTTGATACATGTGCTATTTGTCATCAAGAAACAGAT
TTTGTCGCCTTCTCTGTCCGGGAAGGCGGTTTTCTGTGCTCGCGTCATGCGGAGCAAGATCCGTATCGTATTCCGGTGGG
AGAGGCTGTTCATAAATTATTACGTCTCTTTTTTCACTTTGATTTACACCGGCTCGGTAATGTATCGGTGAAGGATAGTA
CAAAAAAACAAATGCGCACAGTATTGAATACATATTATGACGAATATTGTGGGATTTATTTGAAAACAAGGCGTTTCTTG
GAACAACTTGATAAGTTTCAAATATAA

Domains

Predicted by InterproScan.

Recombination protein O N terminal (RecO_N)

(1-77)

Recombination protein O C terminal (RecO_C)

(82-237)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A366GTN2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recO Bacillus subtilis subsp. subtilis str. 168

55.466

99.597

0.552

Multiple sequence alignment