Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   EXW27_RS22340 Genome accession   NZ_CP035999
Coordinates   4323373..4323831 (-) Length   152 a.a.
NCBI ID   WP_147740070.1    Uniprot ID   -
Organism   Bacillus mycoides strain BPN37/1     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 4318373..4328831
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EXW27_RS22315 (EXW27_22710) - 4318452..4319993 (-) 1542 WP_002014821.1 MDR family MFS transporter -
  EXW27_RS22320 (EXW27_22715) - 4320546..4321046 (+) 501 WP_002033821.1 hypothetical protein -
  EXW27_RS22325 (EXW27_22720) - 4321078..4321311 (-) 234 WP_002014824.1 phage holin -
  EXW27_RS22330 (EXW27_22725) - 4321474..4322127 (+) 654 WP_002033822.1 diguanylate cyclase domain-containing protein -
  EXW27_RS22335 (EXW27_22730) - 4322678..4323340 (+) 663 WP_002014826.1 YkyA family protein -
  EXW27_RS22340 (EXW27_22735) kre 4323373..4323831 (-) 459 WP_147740070.1 YkyB family protein Regulator
  EXW27_RS22345 (EXW27_22740) - 4323973..4325547 (+) 1575 WP_098632793.1 Ppx/GppA family phosphatase -
  EXW27_RS22350 (EXW27_22745) - 4325656..4327764 (+) 2109 WP_147740069.1 polyphosphate kinase -
  EXW27_RS22355 (EXW27_22750) - 4327931..4328167 (-) 237 WP_002014830.1 hypothetical protein -

Sequence

Protein


Download         Length: 152 a.a.        Molecular weight: 17765.51 Da        Isoelectric Point: 10.6793

>NTDB_id=345749 EXW27_RS22340 WP_147740070.1 4323373..4323831(-) (kre) [Bacillus mycoides strain BPN37/1]
MKPSQPQSPLHNQHSINRLAQSIFVVNRHAKAATNPKYLYWLKKTALERLITEKKAIKEGLHFSRNPRFSQQQSDVLIRL
GDYFFHIPPTKDDFRILPHLGHLESSYRNPKTTLSLTIAKKTLQDYIGPEALKQEKKLSEPVPWYSRTYTKK

Nucleotide


Download         Length: 459 bp        

>NTDB_id=345749 EXW27_RS22340 WP_147740070.1 4323373..4323831(-) (kre) [Bacillus mycoides strain BPN37/1]
ATGAAACCTTCACAACCACAATCTCCATTGCATAATCAACATTCTATTAATAGACTAGCTCAATCTATTTTCGTTGTGAA
TCGTCATGCTAAAGCTGCAACTAACCCTAAGTACTTATATTGGTTAAAAAAGACTGCTTTAGAACGCTTAATTACTGAAA
AAAAGGCTATCAAAGAAGGATTACATTTTTCTAGAAATCCACGTTTTAGTCAACAACAATCCGATGTTCTTATACGTTTA
GGTGATTATTTTTTCCATATCCCTCCTACGAAAGATGATTTTCGCATCCTACCGCATCTTGGTCACCTTGAATCCTCCTA
TCGAAATCCGAAAACAACCTTATCTTTAACAATAGCAAAAAAAACACTTCAAGATTATATTGGTCCTGAAGCATTAAAAC
AGGAAAAAAAATTAAGCGAACCAGTTCCATGGTATAGCCGTACCTATACAAAAAAATAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(16-128)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

63.793

76.316

0.487

Multiple sequence alignment