Detailed information
Bioinformatically predicted
Overview
| Name | sinR | Type | Regulator |
| Locus tag | EXW27_RS08515 | Genome accession | NZ_CP035999 |
| Coordinates | 1682145..1682468 (+) | Length | 107 a.a. |
| NCBI ID | WP_002030429.1 | Uniprot ID | A0A084J505 |
| Organism | Bacillus mycoides strain BPN37/1 | ||
| Function | repression of rok; repression of degU; repression of spo0A (predicted from homology) Competence regulation |
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Genomic Context
Location: 1677145..1687468
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EXW27_RS08500 (EXW27_08660) | - | 1677676..1679043 (-) | 1368 | WP_078178273.1 | aldehyde dehydrogenase | - |
| EXW27_RS08505 (EXW27_08665) | inhA1 | 1679201..1681588 (-) | 2388 | WP_002126109.1 | M6 family metalloprotease immune inhibitor InhA1 | - |
| EXW27_RS08510 (EXW27_08670) | - | 1681931..1682065 (+) | 135 | WP_002011474.1 | anti-repressor SinI family protein | - |
| EXW27_RS08515 (EXW27_08675) | sinR | 1682145..1682468 (+) | 324 | WP_002030429.1 | helix-turn-helix domain-containing protein | Regulator |
| EXW27_RS08520 (EXW27_08680) | calY | 1682551..1683144 (-) | 594 | WP_002030430.1 | biofilm matrix protein CalY | - |
| EXW27_RS08525 (EXW27_08685) | - | 1683587..1684420 (-) | 834 | WP_078178764.1 | DUF4047 domain-containing protein | - |
| EXW27_RS08530 (EXW27_08690) | - | 1684582..1685169 (-) | 588 | WP_000172837.1 | CalY family protein | - |
| EXW27_RS08535 (EXW27_08695) | sipW | 1685234..1685803 (-) | 570 | WP_002064334.1 | signal peptidase I SipW | - |
| EXW27_RS08540 (EXW27_08700) | - | 1686000..1687286 (-) | 1287 | WP_002126097.1 | D-alanyl-D-alanine carboxypeptidase family protein | - |
Sequence
Protein
Download Length: 107 a.a. Molecular weight: 12274.04 Da Isoelectric Point: 7.2050
>NTDB_id=345709 EXW27_RS08515 WP_002030429.1 1682145..1682468(+) (sinR) [Bacillus mycoides strain BPN37/1]
MIGERIKRLRLQKGISLTELAEKAGVAKSYISSIERNLQKNPSIQFLEKIAAVLQIPVDTLLHDETTTEGHLDSEWTQLV
KDAMSSGVSKEQFREFLEFTQWKKNQQ
MIGERIKRLRLQKGISLTELAEKAGVAKSYISSIERNLQKNPSIQFLEKIAAVLQIPVDTLLHDETTTEGHLDSEWTQLV
KDAMSSGVSKEQFREFLEFTQWKKNQQ
Nucleotide
Download Length: 324 bp
>NTDB_id=345709 EXW27_RS08515 WP_002030429.1 1682145..1682468(+) (sinR) [Bacillus mycoides strain BPN37/1]
ATGATAGGAGAACGTATAAAACGCCTTCGTTTACAAAAAGGCATTTCATTAACAGAACTCGCCGAAAAAGCTGGTGTCGC
TAAATCTTACATTAGTTCTATAGAACGGAATTTACAAAAAAACCCTTCTATTCAGTTTCTTGAAAAAATTGCAGCTGTTC
TACAAATTCCAGTTGATACTTTACTTCACGATGAAACAACAACGGAGGGTCACCTAGACTCCGAATGGACACAGCTCGTT
AAAGATGCGATGAGCTCTGGTGTCTCAAAAGAACAGTTTCGTGAATTTCTCGAATTTACACAATGGAAGAAAAATCAACA
ATAA
ATGATAGGAGAACGTATAAAACGCCTTCGTTTACAAAAAGGCATTTCATTAACAGAACTCGCCGAAAAAGCTGGTGTCGC
TAAATCTTACATTAGTTCTATAGAACGGAATTTACAAAAAAACCCTTCTATTCAGTTTCTTGAAAAAATTGCAGCTGTTC
TACAAATTCCAGTTGATACTTTACTTCACGATGAAACAACAACGGAGGGTCACCTAGACTCCGAATGGACACAGCTCGTT
AAAGATGCGATGAGCTCTGGTGTCTCAAAAGAACAGTTTCGTGAATTTCTCGAATTTACACAATGGAAGAAAAATCAACA
ATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| sinR | Bacillus subtilis subsp. subtilis str. 168 |
67.89 |
100 |
0.692 |