Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   EXW63_RS21470 Genome accession   NZ_CP035997
Coordinates   4185764..4186222 (-) Length   152 a.a.
NCBI ID   WP_002014827.1    Uniprot ID   J8I023
Organism   Bacillus mycoides strain BPN36/3     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 4180764..4191222
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EXW63_RS21445 (EXW63_21910) - 4180841..4182382 (-) 1542 WP_002014821.1 MDR family MFS transporter -
  EXW63_RS21450 (EXW63_21915) - 4182937..4183437 (+) 501 WP_002014823.1 hypothetical protein -
  EXW63_RS21455 (EXW63_21920) - 4183469..4183702 (-) 234 WP_002014824.1 phage holin -
  EXW63_RS21460 (EXW63_21925) - 4183865..4184518 (+) 654 WP_002033822.1 diguanylate cyclase -
  EXW63_RS21465 (EXW63_21930) - 4185069..4185731 (+) 663 WP_215551767.1 YkyA family protein -
  EXW63_RS21470 (EXW63_21935) kre 4185764..4186222 (-) 459 WP_002014827.1 YkyB family protein Regulator
  EXW63_RS21475 (EXW63_21940) - 4186364..4187938 (+) 1575 WP_215551768.1 Ppx/GppA family phosphatase -
  EXW63_RS21480 (EXW63_21945) - 4188047..4190155 (+) 2109 WP_061689315.1 polyphosphate kinase -
  EXW63_RS21485 (EXW63_21950) - 4190322..4190558 (-) 237 WP_002014830.1 hypothetical protein -

Sequence

Protein


Download         Length: 152 a.a.        Molecular weight: 17753.46 Da        Isoelectric Point: 10.6793

>NTDB_id=345698 EXW63_RS21470 WP_002014827.1 4185764..4186222(-) (kre) [Bacillus mycoides strain BPN36/3]
MKPSQPQSPLHNQHSINRLAQSIFVVNRHAKAATNPKYLYWLKKTALERLITEKKAIKEGLHFSRNPRFSQQQSDVLIRL
GDYFFHIPPTKDDFRTLPHLGHLESSYRNPKTTLSLTIAKKTLQDYIGPEALKQEKKLSEPVPWYSRTYTKK

Nucleotide


Download         Length: 459 bp        

>NTDB_id=345698 EXW63_RS21470 WP_002014827.1 4185764..4186222(-) (kre) [Bacillus mycoides strain BPN36/3]
ATGAAACCTTCACAACCACAATCTCCATTGCATAATCAACATTCTATTAATAGACTAGCTCAATCTATTTTCGTTGTGAA
TCGTCATGCTAAAGCTGCAACTAACCCTAAGTACTTATATTGGTTAAAAAAAACTGCTTTAGAACGCTTAATTACTGAAA
AAAAGGCTATCAAAGAAGGATTACATTTTTCTAGAAATCCACGTTTTAGTCAACAACAATCCGATGTTCTTATACGTTTA
GGTGATTATTTTTTCCATATCCCTCCTACGAAAGATGATTTTCGCACCCTACCGCATCTTGGTCACCTTGAATCCTCCTA
TCGAAATCCGAAAACAACCTTATCTTTAACAATAGCAAAAAAAACACTTCAAGATTATATTGGTCCTGAAGCATTAAAAC
AGGAAAAAAAATTAAGCGAACCAGTTCCATGGTATAGCCGTACCTATACAAAAAAATAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(16-128)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB J8I023

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

63.793

76.316

0.487

Multiple sequence alignment