Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   EXW63_RS08215 Genome accession   NZ_CP035997
Coordinates   1610467..1610643 (-) Length   58 a.a.
NCBI ID   WP_002011319.1    Uniprot ID   A0A366GET8
Organism   Bacillus mycoides strain BPN36/3     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 1605467..1615643
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EXW63_RS08195 (EXW63_08360) - 1606039..1606785 (-) 747 WP_002030367.1 YjbA family protein -
  EXW63_RS08200 (EXW63_08365) - 1606927..1607718 (-) 792 WP_002030365.1 DUF2268 domain-containing putative Zn-dependent protease -
  EXW63_RS08205 (EXW63_08370) fabF 1607834..1609072 (-) 1239 WP_061688962.1 beta-ketoacyl-ACP synthase II -
  EXW63_RS08210 (EXW63_08375) fabH 1609104..1610036 (-) 933 WP_098167263.1 beta-ketoacyl-ACP synthase III -
  EXW63_RS08215 (EXW63_08380) comZ 1610467..1610643 (-) 177 WP_002011319.1 ComZ family protein Regulator
  EXW63_RS08220 (EXW63_08385) - 1610708..1611580 (-) 873 WP_002134958.1 NAD(P)-dependent oxidoreductase -
  EXW63_RS08225 (EXW63_08390) - 1611610..1612344 (-) 735 WP_002030268.1 hydrolase -
  EXW63_RS08230 (EXW63_08395) - 1612501..1612683 (+) 183 WP_001211111.1 YjzD family protein -
  EXW63_RS08235 (EXW63_08400) clpB 1612715..1615315 (-) 2601 WP_215552761.1 ATP-dependent chaperone ClpB -

Sequence

Protein


Download         Length: 58 a.a.        Molecular weight: 6491.67 Da        Isoelectric Point: 4.6653

>NTDB_id=345663 EXW63_RS08215 WP_002011319.1 1610467..1610643(-) (comZ) [Bacillus mycoides strain BPN36/3]
MNEKSMQFLQIAMKHLPEAKAILDSNGIALDMEKAQPVLELLMKVMGEAYELGKADKE

Nucleotide


Download         Length: 177 bp        

>NTDB_id=345663 EXW63_RS08215 WP_002011319.1 1610467..1610643(-) (comZ) [Bacillus mycoides strain BPN36/3]
ATGAACGAAAAAAGTATGCAATTTTTACAAATCGCAATGAAGCATTTACCAGAAGCAAAGGCAATTTTAGATTCTAATGG
AATTGCACTTGATATGGAGAAAGCACAGCCGGTGTTAGAGCTATTGATGAAAGTAATGGGCGAAGCATATGAGCTTGGGA
AAGCAGATAAAGAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(3-57)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A366GET8

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

61.818

94.828

0.586

Multiple sequence alignment