Detailed information
Bioinformatically predicted
Overview
| Name | recR | Type | Machinery gene |
| Locus tag | PaeAG1_RS21085 | Genome accession | NZ_CP045739 |
| Coordinates | 4476086..4476682 (-) | Length | 198 a.a. |
| NCBI ID | WP_003087237.1 | Uniprot ID | Q9I3H9 |
| Organism | Pseudomonas aeruginosa strain AG1 | ||
| Function | promote later steps in plasmid transformation (predicted from homology) Homologous recombination |
||
Genomic Context
Location: 4471086..4481682
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PaeAG1_RS34355 | - | 4471480..4471629 (-) | 150 | Protein_4179 | hypothetical protein | - |
| PaeAG1_RS21065 (PaeAG1_04161) | - | 4471722..4473305 (+) | 1584 | WP_003121915.1 | NAD(P)/FAD-dependent oxidoreductase | - |
| PaeAG1_RS21070 (PaeAG1_04162) | - | 4473302..4474189 (+) | 888 | WP_003103932.1 | SDR family NAD(P)-dependent oxidoreductase | - |
| PaeAG1_RS21075 (PaeAG1_04163) | - | 4474263..4474802 (+) | 540 | WP_003103931.1 | CbrC family protein | - |
| PaeAG1_RS21080 (PaeAG1_04164) | - | 4474815..4475963 (-) | 1149 | WP_015648510.1 | acyl-CoA dehydrogenase family protein | - |
| PaeAG1_RS21085 (PaeAG1_04165) | recR | 4476086..4476682 (-) | 597 | WP_003087237.1 | recombination mediator RecR | Machinery gene |
| PaeAG1_RS21090 (PaeAG1_04166) | - | 4476761..4477087 (-) | 327 | WP_003087236.1 | YbaB/EbfC family nucleoid-associated protein | - |
| PaeAG1_RS21095 (PaeAG1_04167) | dnaX | 4477133..4479202 (-) | 2070 | WP_033979755.1 | DNA polymerase III subunit gamma/tau | - |
| PaeAG1_RS21100 (PaeAG1_04168) | - | 4479239..4480105 (+) | 867 | WP_074197913.1 | ABC transporter substrate-binding protein | - |
Sequence
Protein
Download Length: 198 a.a. Molecular weight: 21173.42 Da Isoelectric Point: 6.0063
>NTDB_id=345645 PaeAG1_RS21085 WP_003087237.1 4476086..4476682(-) (recR) [Pseudomonas aeruginosa strain AG1]
MSFSPLIRQLIESLRILPGVGQKSAQRMALMLLERDRSGGLKLAQALTAAMEGVGHCRQCRTLSEEELCPQCADPRRDDS
LLCVVEGPLDVFAVEQTGYRGRYFVLKGHLSPLDGLGPEAIGIPELEARIRDGAFSEVILATNPTVEGEATAHYIAQLLA
GRGLTLSRIAHGVPLGGELELVDGGTLAHALAGRRPIS
MSFSPLIRQLIESLRILPGVGQKSAQRMALMLLERDRSGGLKLAQALTAAMEGVGHCRQCRTLSEEELCPQCADPRRDDS
LLCVVEGPLDVFAVEQTGYRGRYFVLKGHLSPLDGLGPEAIGIPELEARIRDGAFSEVILATNPTVEGEATAHYIAQLLA
GRGLTLSRIAHGVPLGGELELVDGGTLAHALAGRRPIS
Nucleotide
Download Length: 597 bp
>NTDB_id=345645 PaeAG1_RS21085 WP_003087237.1 4476086..4476682(-) (recR) [Pseudomonas aeruginosa strain AG1]
ATGAGTTTCAGCCCGCTGATCCGCCAACTGATCGAGTCCCTGCGCATTCTTCCCGGTGTCGGGCAGAAGTCGGCCCAGCG
CATGGCGCTGATGCTGCTGGAGCGCGATCGCAGCGGCGGCCTGAAGCTGGCCCAGGCGTTGACCGCCGCGATGGAAGGGG
TCGGTCATTGCCGGCAGTGCCGTACCCTCAGCGAGGAGGAGCTGTGCCCGCAGTGCGCCGACCCGCGACGCGACGACTCG
CTGCTCTGCGTGGTGGAAGGCCCGCTGGACGTATTCGCGGTGGAGCAGACCGGCTACCGCGGCCGCTATTTCGTGCTCAA
GGGACACCTGTCGCCGCTCGACGGCCTGGGGCCGGAGGCGATCGGCATTCCCGAACTGGAAGCGCGGATCAGGGACGGAG
CCTTCAGCGAGGTGATCCTCGCCACCAACCCCACCGTCGAAGGCGAGGCCACCGCCCACTATATCGCCCAGCTACTGGCC
GGCCGCGGCCTGACCTTGTCGCGTATCGCCCATGGCGTGCCGCTGGGCGGCGAGCTGGAGCTGGTCGATGGCGGCACCTT
GGCCCACGCCCTGGCCGGACGGCGGCCGATCTCCTGA
ATGAGTTTCAGCCCGCTGATCCGCCAACTGATCGAGTCCCTGCGCATTCTTCCCGGTGTCGGGCAGAAGTCGGCCCAGCG
CATGGCGCTGATGCTGCTGGAGCGCGATCGCAGCGGCGGCCTGAAGCTGGCCCAGGCGTTGACCGCCGCGATGGAAGGGG
TCGGTCATTGCCGGCAGTGCCGTACCCTCAGCGAGGAGGAGCTGTGCCCGCAGTGCGCCGACCCGCGACGCGACGACTCG
CTGCTCTGCGTGGTGGAAGGCCCGCTGGACGTATTCGCGGTGGAGCAGACCGGCTACCGCGGCCGCTATTTCGTGCTCAA
GGGACACCTGTCGCCGCTCGACGGCCTGGGGCCGGAGGCGATCGGCATTCCCGAACTGGAAGCGCGGATCAGGGACGGAG
CCTTCAGCGAGGTGATCCTCGCCACCAACCCCACCGTCGAAGGCGAGGCCACCGCCCACTATATCGCCCAGCTACTGGCC
GGCCGCGGCCTGACCTTGTCGCGTATCGCCCATGGCGTGCCGCTGGGCGGCGAGCTGGAGCTGGTCGATGGCGGCACCTT
GGCCCACGCCCTGGCCGGACGGCGGCCGATCTCCTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| recR | Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539 |
48.241 |
100 |
0.485 |
| recR | Bacillus subtilis subsp. subtilis str. 168 |
48.469 |
98.99 |
0.48 |