Detailed information
Bioinformatically predicted
Overview
| Name | sinR | Type | Regulator |
| Locus tag | EXW32_RS06465 | Genome accession | NZ_CP035994 |
| Coordinates | 1274384..1274707 (-) | Length | 107 a.a. |
| NCBI ID | WP_002030429.1 | Uniprot ID | A0A084J505 |
| Organism | Bacillus mycoides strain BPN36/2 | ||
| Function | repression of rok; repression of degU; repression of spo0A (predicted from homology) Competence regulation |
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Genomic Context
Location: 1269384..1279707
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EXW32_RS06440 (EXW32_06590) | - | 1269562..1270848 (+) | 1287 | WP_002126097.1 | D-alanyl-D-alanine carboxypeptidase family protein | - |
| EXW32_RS06445 (EXW32_06595) | sipW | 1271046..1271615 (+) | 570 | WP_002064334.1 | signal peptidase I SipW | - |
| EXW32_RS06450 (EXW32_06600) | - | 1271682..1272269 (+) | 588 | WP_000172837.1 | CalY family protein | - |
| EXW32_RS06455 (EXW32_06605) | - | 1272431..1273264 (+) | 834 | WP_002168858.1 | DUF4047 domain-containing protein | - |
| EXW32_RS06460 (EXW32_06610) | calY | 1273708..1274301 (+) | 594 | WP_002126106.1 | biofilm matrix protein CalY | - |
| EXW32_RS06465 (EXW32_06615) | sinR | 1274384..1274707 (-) | 324 | WP_002030429.1 | helix-turn-helix domain-containing protein | Regulator |
| EXW32_RS06470 (EXW32_06620) | - | 1274787..1274921 (-) | 135 | WP_002011474.1 | anti-repressor SinI family protein | - |
| EXW32_RS06475 (EXW32_06625) | inhA1 | 1275264..1277651 (+) | 2388 | WP_002126109.1 | M6 family metalloprotease immune inhibitor InhA1 | - |
| EXW32_RS06480 (EXW32_06630) | - | 1277822..1279189 (+) | 1368 | WP_215564141.1 | aldehyde dehydrogenase | - |
Sequence
Protein
Download Length: 107 a.a. Molecular weight: 12274.04 Da Isoelectric Point: 7.2050
>NTDB_id=345619 EXW32_RS06465 WP_002030429.1 1274384..1274707(-) (sinR) [Bacillus mycoides strain BPN36/2]
MIGERIKRLRLQKGISLTELAEKAGVAKSYISSIERNLQKNPSIQFLEKIAAVLQIPVDTLLHDETTTEGHLDSEWTQLV
KDAMSSGVSKEQFREFLEFTQWKKNQQ
MIGERIKRLRLQKGISLTELAEKAGVAKSYISSIERNLQKNPSIQFLEKIAAVLQIPVDTLLHDETTTEGHLDSEWTQLV
KDAMSSGVSKEQFREFLEFTQWKKNQQ
Nucleotide
Download Length: 324 bp
>NTDB_id=345619 EXW32_RS06465 WP_002030429.1 1274384..1274707(-) (sinR) [Bacillus mycoides strain BPN36/2]
ATGATAGGAGAACGTATAAAACGCCTTCGTTTACAAAAAGGCATTTCATTAACAGAACTCGCCGAAAAAGCTGGTGTCGC
TAAATCTTACATTAGTTCTATAGAACGAAATTTACAAAAAAACCCTTCTATTCAGTTTCTTGAAAAAATTGCAGCTGTTC
TACAAATTCCAGTTGATACTTTACTTCACGATGAAACAACAACGGAGGGTCACCTAGACTCCGAATGGACACAGCTCGTT
AAAGATGCGATGAGCTCTGGTGTCTCAAAAGAACAGTTTCGTGAATTTCTCGAATTTACACAATGGAAGAAAAATCAACA
ATAA
ATGATAGGAGAACGTATAAAACGCCTTCGTTTACAAAAAGGCATTTCATTAACAGAACTCGCCGAAAAAGCTGGTGTCGC
TAAATCTTACATTAGTTCTATAGAACGAAATTTACAAAAAAACCCTTCTATTCAGTTTCTTGAAAAAATTGCAGCTGTTC
TACAAATTCCAGTTGATACTTTACTTCACGATGAAACAACAACGGAGGGTCACCTAGACTCCGAATGGACACAGCTCGTT
AAAGATGCGATGAGCTCTGGTGTCTCAAAAGAACAGTTTCGTGAATTTCTCGAATTTACACAATGGAAGAAAAATCAACA
ATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| sinR | Bacillus subtilis subsp. subtilis str. 168 |
67.89 |
100 |
0.692 |