Detailed information
Bioinformatically predicted
Overview
| Name | abrB | Type | Regulator |
| Locus tag | EXW60_RS26245 | Genome accession | NZ_CP035987 |
| Coordinates | 5130480..5130758 (-) | Length | 92 a.a. |
| NCBI ID | WP_060750994.1 | Uniprot ID | A0A2B8R1V0 |
| Organism | Bacillus mycoides strain BPN29/1 | ||
| Function | repression of comK; repression of rok (predicted from homology) Competence regulation |
||
Genomic Context
Location: 5125480..5135758
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EXW60_RS26205 (EXW60_26755) | - | 5125667..5126668 (-) | 1002 | WP_063218852.1 | LacI family DNA-binding transcriptional regulator | - |
| EXW60_RS26210 (EXW60_26760) | - | 5126854..5127561 (-) | 708 | WP_215586605.1 | IS6 family transposase | - |
| EXW60_RS26215 (EXW60_26765) | - | 5127658..5127906 (-) | 249 | Protein_5149 | IS6 family transposase | - |
| EXW60_RS26220 | - | 5128072..5128215 (-) | 144 | WP_002144257.1 | hypothetical protein | - |
| EXW60_RS26225 (EXW60_26770) | - | 5128218..5128580 (-) | 363 | WP_215586606.1 | hypothetical protein | - |
| EXW60_RS26230 (EXW60_26775) | - | 5128813..5129316 (+) | 504 | WP_215586607.1 | hypothetical protein | - |
| EXW60_RS26235 (EXW60_26780) | - | 5129306..5129773 (+) | 468 | WP_215586608.1 | hypothetical protein | - |
| EXW60_RS26240 (EXW60_26785) | - | 5129936..5130163 (+) | 228 | WP_098501778.1 | hypothetical protein | - |
| EXW60_RS26245 (EXW60_26790) | abrB | 5130480..5130758 (-) | 279 | WP_060750994.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Regulator |
| EXW60_RS26255 (EXW60_26795) | - | 5131341..5131779 (-) | 439 | Protein_5156 | SAM-dependent methyltransferase | - |
| EXW60_RS26260 (EXW60_26800) | - | 5132036..5132560 (-) | 525 | WP_215586609.1 | ester cyclase | - |
| EXW60_RS26265 (EXW60_26805) | - | 5132714..5133106 (-) | 393 | WP_098169077.1 | nuclear transport factor 2 family protein | - |
| EXW60_RS26270 (EXW60_26810) | - | 5133111..5133932 (-) | 822 | WP_061689679.1 | MBL fold metallo-hydrolase | - |
| EXW60_RS26275 (EXW60_26815) | - | 5134227..5134847 (-) | 621 | WP_002033220.1 | DsbA family protein | - |
Sequence
Protein
Download Length: 92 a.a. Molecular weight: 10063.73 Da Isoelectric Point: 6.3325
>NTDB_id=345597 EXW60_RS26245 WP_060750994.1 5130480..5130758(-) (abrB) [Bacillus mycoides strain BPN29/1]
MKATGVTRKVDDLGRVVIPKELRNTLGIKEKSPLEIFVEGEDIILQKYQPGGVCALTGEVSNRNISLANGKITLSPEGAE
LLIKEVEQYLVK
MKATGVTRKVDDLGRVVIPKELRNTLGIKEKSPLEIFVEGEDIILQKYQPGGVCALTGEVSNRNISLANGKITLSPEGAE
LLIKEVEQYLVK
Nucleotide
Download Length: 279 bp
>NTDB_id=345597 EXW60_RS26245 WP_060750994.1 5130480..5130758(-) (abrB) [Bacillus mycoides strain BPN29/1]
ATGAAAGCAACCGGAGTGACTAGAAAAGTAGATGATTTAGGGCGTGTAGTAATTCCAAAGGAACTTAGAAATACGCTAGG
TATTAAAGAAAAATCACCATTAGAGATCTTTGTAGAAGGTGAAGACATTATTTTACAGAAATATCAGCCCGGTGGTGTTT
GTGCATTAACAGGAGAGGTATCAAATCGTAACATATCATTAGCAAACGGTAAGATAACATTGAGTCCAGAAGGTGCCGAA
CTATTAATAAAAGAAGTAGAACAGTACCTTGTAAAATAA
ATGAAAGCAACCGGAGTGACTAGAAAAGTAGATGATTTAGGGCGTGTAGTAATTCCAAAGGAACTTAGAAATACGCTAGG
TATTAAAGAAAAATCACCATTAGAGATCTTTGTAGAAGGTGAAGACATTATTTTACAGAAATATCAGCCCGGTGGTGTTT
GTGCATTAACAGGAGAGGTATCAAATCGTAACATATCATTAGCAAACGGTAAGATAACATTGAGTCCAGAAGGTGCCGAA
CTATTAATAAAAGAAGTAGAACAGTACCTTGTAAAATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| abrB | Bacillus subtilis subsp. subtilis str. 168 |
61.111 |
97.826 |
0.598 |