Detailed information
Bioinformatically predicted
Overview
| Name | abrB | Type | Regulator |
| Locus tag | EXW60_RS20320 | Genome accession | NZ_CP035987 |
| Coordinates | 3961692..3961979 (+) | Length | 95 a.a. |
| NCBI ID | WP_002012401.1 | Uniprot ID | A0A366G1Y4 |
| Organism | Bacillus mycoides strain BPN29/1 | ||
| Function | repression of comK; repression of rok (predicted from homology) Competence regulation |
||
Genomic Context
Location: 3956692..3966979
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EXW60_RS20300 (EXW60_20655) | - | 3957875..3958075 (+) | 201 | WP_215587660.1 | DUF4083 domain-containing protein | - |
| EXW60_RS20305 (EXW60_20660) | - | 3958103..3958564 (+) | 462 | WP_002141378.1 | NUDIX hydrolase | - |
| EXW60_RS20310 (EXW60_20665) | nadE | 3958609..3959427 (-) | 819 | WP_002031433.1 | ammonia-dependent NAD(+) synthetase | - |
| EXW60_RS20315 (EXW60_20670) | - | 3959692..3961572 (+) | 1881 | WP_215587661.1 | ABC transporter permease | - |
| EXW60_RS20320 (EXW60_20675) | abrB | 3961692..3961979 (+) | 288 | WP_002012401.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Regulator |
| EXW60_RS20325 (EXW60_20680) | - | 3962270..3963220 (+) | 951 | WP_002012402.1 | serine protease | - |
| EXW60_RS20330 (EXW60_20685) | - | 3963261..3963569 (-) | 309 | WP_016102179.1 | helix-turn-helix transcriptional regulator | - |
| EXW60_RS20335 (EXW60_20690) | - | 3963677..3964612 (+) | 936 | WP_215587662.1 | aldo/keto reductase | - |
| EXW60_RS20340 (EXW60_20695) | - | 3964662..3965837 (+) | 1176 | WP_215587663.1 | MFS transporter | - |
| EXW60_RS20345 (EXW60_20700) | - | 3966047..3966271 (-) | 225 | WP_000162608.1 | hypothetical protein | - |
| EXW60_RS20350 (EXW60_20705) | - | 3966356..3966703 (-) | 348 | WP_000426320.1 | DUF4257 domain-containing protein | - |
Sequence
Protein
Download Length: 95 a.a. Molecular weight: 10647.42 Da Isoelectric Point: 6.9795
>NTDB_id=345589 EXW60_RS20320 WP_002012401.1 3961692..3961979(+) (abrB) [Bacillus mycoides strain BPN29/1]
MKATGIIRKVDELGRIVIPKELRDVLGIQIKSPLEIFVEEDKVILQKYQPYNACQITGDVSDQNISLANGNITVSIEGAK
HVIKEIEQFLNKSKI
MKATGIIRKVDELGRIVIPKELRDVLGIQIKSPLEIFVEEDKVILQKYQPYNACQITGDVSDQNISLANGNITVSIEGAK
HVIKEIEQFLNKSKI
Nucleotide
Download Length: 288 bp
>NTDB_id=345589 EXW60_RS20320 WP_002012401.1 3961692..3961979(+) (abrB) [Bacillus mycoides strain BPN29/1]
ATGAAAGCAACAGGAATTATTCGAAAAGTAGATGAATTGGGACGGATAGTTATTCCTAAAGAATTACGAGATGTATTAGG
AATACAAATCAAATCACCACTTGAAATTTTTGTAGAAGAAGACAAAGTCATTTTACAAAAATATCAACCTTACAATGCTT
GTCAAATAACAGGTGATGTTTCAGACCAAAATATTTCATTAGCAAATGGAAACATTACTGTTAGTATAGAAGGCGCAAAA
CATGTAATAAAAGAAATTGAGCAGTTTTTGAACAAGAGTAAGATTTAG
ATGAAAGCAACAGGAATTATTCGAAAAGTAGATGAATTGGGACGGATAGTTATTCCTAAAGAATTACGAGATGTATTAGG
AATACAAATCAAATCACCACTTGAAATTTTTGTAGAAGAAGACAAAGTCATTTTACAAAAATATCAACCTTACAATGCTT
GTCAAATAACAGGTGATGTTTCAGACCAAAATATTTCATTAGCAAATGGAAACATTACTGTTAGTATAGAAGGCGCAAAA
CATGTAATAAAAGAAATTGAGCAGTTTTTGAACAAGAGTAAGATTTAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| abrB | Bacillus subtilis subsp. subtilis str. 168 |
56.383 |
98.947 |
0.558 |