Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   EXW60_RS16485 Genome accession   NZ_CP035987
Coordinates   3217820..3217996 (+) Length   58 a.a.
NCBI ID   WP_002011319.1    Uniprot ID   A0A366GET8
Organism   Bacillus mycoides strain BPN29/1     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 3212820..3222996
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EXW60_RS16465 (EXW60_16785) clpB 3213147..3215747 (+) 2601 WP_061675299.1 ATP-dependent chaperone ClpB -
  EXW60_RS16470 (EXW60_16790) - 3215781..3215963 (-) 183 WP_001211111.1 YjzD family protein -
  EXW60_RS16475 (EXW60_16795) - 3216119..3216853 (+) 735 WP_002030268.1 hydrolase -
  EXW60_RS16480 (EXW60_16800) - 3216883..3217755 (+) 873 WP_088038876.1 NAD(P)-dependent oxidoreductase -
  EXW60_RS16485 (EXW60_16805) comZ 3217820..3217996 (+) 177 WP_002011319.1 ComZ family protein Regulator
  EXW60_RS16490 (EXW60_16810) fabH 3218432..3219364 (+) 933 WP_001100550.1 beta-ketoacyl-ACP synthase III -
  EXW60_RS16495 (EXW60_16815) fabF 3219396..3220634 (+) 1239 WP_061688962.1 beta-ketoacyl-ACP synthase II -
  EXW60_RS16500 (EXW60_16820) - 3220750..3221541 (+) 792 WP_215587454.1 DUF2268 domain-containing protein -
  EXW60_RS16505 (EXW60_16825) - 3221683..3222429 (+) 747 WP_002030367.1 YjbA family protein -

Sequence

Protein


Download         Length: 58 a.a.        Molecular weight: 6491.67 Da        Isoelectric Point: 4.6653

>NTDB_id=345581 EXW60_RS16485 WP_002011319.1 3217820..3217996(+) (comZ) [Bacillus mycoides strain BPN29/1]
MNEKSMQFLQIAMKHLPEAKAILDSNGIALDMEKAQPVLELLMKVMGEAYELGKADKE

Nucleotide


Download         Length: 177 bp        

>NTDB_id=345581 EXW60_RS16485 WP_002011319.1 3217820..3217996(+) (comZ) [Bacillus mycoides strain BPN29/1]
ATGAACGAAAAAAGTATGCAATTTTTACAAATCGCAATGAAGCACTTACCAGAAGCAAAGGCAATTTTAGATTCTAATGG
AATTGCACTTGATATGGAGAAAGCACAGCCGGTGTTAGAGCTATTGATGAAAGTAATGGGCGAAGCATATGAGCTTGGGA
AAGCAGATAAAGAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(3-57)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A366GET8

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

61.818

94.828

0.586

Multiple sequence alignment